RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SPOCD1Q6ZMY3 1216 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 ZBTB2Q8N680 514 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 OR8K1Q8NGG5 319 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 OR1L3Q8NH93 324 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 ZNF398Q8TD17 642 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 CPT1BQ92523 772 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 VAT1Q99536 393 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 CUEDC1Q9NWM3 386 aaPredicted RBP17.91■□□□□ 0.46
CCDC43-204ENST00000588687 SOHLH2Q9NX45 425 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 LUZP4Q9P127 313 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 SNX7Q9UNH6 387 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 ZNF451Q9Y4E5 1061 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.91■□□□□ 0.461e-7■■□□□ 12.3
CCDC43-204ENST00000588687 PCM1Q15154 2024 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 hCG_1818297A0A087WSY0 165 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 KLHL33A6NCF5 533 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 SLC9B1P1A6NJY1 282 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 AKR1B10O60218 316 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 SLC35G4P0C7Q5 338 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 POLR2CP19387 275 aaPredicted RBP17.9■□□□□ 0.46
CCDC43-204ENST00000588687 MSH3P20585 1137 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 PRLHRP49683 370 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 MRPL49Q13405 166 aaKnown RBP17.9■□□□□ 0.46
CCDC43-204ENST00000588687 TFDP2Q14188 446 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 TMTC4Q5T4D3 741 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 BZW1Q7L1Q6 419 aaKnown RBP17.9■□□□□ 0.46
CCDC43-204ENST00000588687 ZC3H18Q86VM9 953 aaKnown RBP17.9■□□□□ 0.46
CCDC43-204ENST00000588687 SYTL1Q8IYJ3 562 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 GLIS1Q8NBF1 620 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 DEF6Q9H4E7 631 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 C1GALT1Q9NS00 363 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 ABHD10Q9NUJ1 306 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 FAM8A1Q9UBU6 413 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 FKBPLQ9UIM3 349 aa17.9■□□□□ 0.46
CCDC43-204ENST00000588687 PSTPIP1O43586 416 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 SRP72O76094 671 aaKnown RBP17.89■□□□□ 0.45
CCDC43-204ENST00000588687 AGTP01019 485 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 KLK3P07288 261 aaPredicted RBP17.89■□□□□ 0.45
CCDC43-204ENST00000588687 ST6GAL1P15907 406 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 ADRA1AP35348 466 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 MARCKSL1P49006 195 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 VAV2P52735 878 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 OLIG2Q13516 323 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 NCF4Q15080 339 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 KAZNQ674X7 775 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 OR4K2Q8NGD2 314 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 HM13Q8TCT9 377 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 HAUS1Q96CS2 278 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 SMAD5Q99717 465 aaKnown RBP17.89■□□□□ 0.45
CCDC43-204ENST00000588687 GBA3Q9H227 469 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 GOLPH3Q9H4A6 298 aa17.89■□□□□ 0.45
CCDC43-204ENST00000588687 TMEM150CB9EJG8 249 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 H3BMH7 237 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 BTN3A3O00478 584 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 BTN3A1O00481 513 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 STX7O15400 261 aaKnown RBP17.88■□□□□ 0.45
CCDC43-204ENST00000588687 DPM1O60762 260 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 TNNT1P13805 278 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 NDUFS1P28331 727 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 ATP1A4Q13733 1029 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 TAF1AQ15573 450 aaPredicted RBP17.88■□□□□ 0.45
CCDC43-204ENST00000588687 PTCHD3Q3KNS1 767 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 TFDP3Q5H9I0 405 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 RANBP10Q6VN20 620 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 MICALCLQ6ZW33 695 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 PID1Q7Z2X4 250 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 HPS6Q86YV9 775 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 ACVR1CQ8NER5 493 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 OR4E2Q8NGC2 313 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 P3H4Q92791 437 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 PNPLA2Q96AD5 504 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 FICDQ9BVA6 458 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 FSD1LQ9BXM9 530 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 OR52A5Q9H2C5 316 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 ASB8Q9H765 288 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 ACTR5Q9H9F9 607 aaPredicted RBP17.88■□□□□ 0.45
CCDC43-204ENST00000588687 NHEJ1Q9H9Q4 299 aaPredicted RBP17.88■□□□□ 0.45
CCDC43-204ENST00000588687 RSPH14Q9UHP6 348 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 NUP210LQ5VU65 1888 aa17.88■□□□□ 0.45
CCDC43-204ENST00000588687 PIKFYVEQ9Y2I7 2098 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 CREBBPQ92793 2442 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 IGLV3-16A0A075B6K0 115 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 WIPF3A6NGB9 483 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 GOLGA6L19H0YKK7 550 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 MATN2O00339 956 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 SPOPO43791 374 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 MFAP3LO75121 409 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 KLF7O75840 302 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-204ENST00000588687 PYGMP11217 842 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 CDH3P22223 829 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 PRDX3P30048 256 aaKnown RBP17.87■□□□□ 0.45
CCDC43-204ENST00000588687 LMAN1P49257 510 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 ZNF140P52738 457 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-204ENST00000588687 HADHBP55084 474 aaKnown RBP17.87■□□□□ 0.45
CCDC43-204ENST00000588687 TRIM14Q14142 442 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 ARMC6Q6NXE6 501 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 MED25Q71SY5 747 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 KATNAL2Q8IYT4 538 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 TMEM102Q8N9M5 508 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-204ENST00000588687 OR13C4Q8NGS5 318 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms