RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 FKBP10Q96AY3 582 aa6.6□□□□□ -1.35
TPM4-210ENST00000588507 FAXDC2Q96IV6 333 aa6.6□□□□□ -1.35
TPM4-210ENST00000588507 EXOC2Q96KP1 924 aa6.6□□□□□ -1.35
TPM4-210ENST00000588507 DACH2Q96NX9 599 aa6.6□□□□□ -1.35
TPM4-210ENST00000588507 TUBGCP5Q96RT8 1024 aa6.6□□□□□ -1.35
TPM4-210ENST00000588507 SPSB2Q99619 263 aa6.6□□□□□ -1.35
TPM4-210ENST00000588507 TXLNGQ9NUQ3 528 aa6.6□□□□□ -1.35
TPM4-210ENST00000588507 SPTLC3Q9NUV7 552 aa6.6□□□□□ -1.35
TPM4-210ENST00000588507 B4GALT6Q9UBX8 382 aa6.6□□□□□ -1.35
TPM4-210ENST00000588507 SCN2AQ99250 2005 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 OR52A4PA6NMU1 304 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 FAM157AC9JC47 383 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 UBFD1O14562 309 aaKnown RBP6.59□□□□□ -1.35
TPM4-210ENST00000588507 CASKO14936 926 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 TFECO14948 347 aaPredicted RBP6.59□□□□□ -1.35
TPM4-210ENST00000588507 LMX1BO60663 402 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 SRGAP2O75044 1071 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 ONECUT2O95948 504 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 ATP1A1P05023 1023 aaKnown RBP6.59□□□□□ -1.35
TPM4-210ENST00000588507 TFEBP19484 476 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 HNF1AP20823 631 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 CDH3P22223 829 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 IDUAP35475 653 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 RAB28P51157 221 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 KPNA2P52292 529 aaKnown RBP6.59□□□□□ -1.35
TPM4-210ENST00000588507 SORDQ00796 357 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 NME3Q13232 169 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 ETFDHQ16134 617 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 CNGA3Q16281 694 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 GXYLT1Q4G148 440 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 INO80DQ53TQ3 878 aaPredicted RBP6.59□□□□□ -1.35
TPM4-210ENST00000588507 ARL6IP4Q66PJ3 421 aaKnown RBP6.59□□□□□ -1.35
TPM4-210ENST00000588507 ABRAXAS1Q6UWZ7 409 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 SHISA6Q6ZSJ9 500 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 Q6ZVL8 140 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 NEK10Q6ZWH5 1172 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.59□□□□□ -1.35
TPM4-210ENST00000588507 HSD11B1LQ7Z5J1 315 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 OOSP2Q86WS3 158 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 AMER3Q8N944 861 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 NUP43Q8NFH3 380 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 ZNF507Q8TCN5 953 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 TMEM171Q8WVE6 324 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 SLCO2A1Q92959 643 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 RBMXL1Q96E39 390 aaKnown RBP6.59□□□□□ -1.35
TPM4-210ENST00000588507 COX14Q96I36 57 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 CELF6Q96J87 481 aaKnown RBP6.59□□□□□ -1.35
TPM4-210ENST00000588507 C1orf74Q96LT6 269 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 PPM1MQ96MI6 270 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 OLFM1Q99784 485 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 ZNF747Q9BV97 191 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 BACH2Q9BYV9 841 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 ZYG11BQ9C0D3 744 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 CXorf56Q9H5V9 222 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 SOX17Q9H6I2 414 aaPredicted RBP6.59□□□□□ -1.35
TPM4-210ENST00000588507 SLC22A11Q9NSA0 550 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 PDRG1Q9NUG6 133 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 ZFATQ9P243 1243 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 MTRF1LQ9UGC7 380 aaKnown RBP6.59□□□□□ -1.35
TPM4-210ENST00000588507 KIAA1257Q9ULG3 409 aa6.59□□□□□ -1.35
TPM4-210ENST00000588507 GSAPA4D1B5 854 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 M0QYV0 167 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 PSMD11O00231 422 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 QSOX1O00391 747 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 KDELR3O43731 214 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 TMCC2O75069 709 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 OR2B3O76000 313 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 HEXIM1O94992 359 aaKnown RBP6.58□□□□□ -1.36
TPM4-210ENST00000588507 PYGLP06737 847 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 SP1P08047 785 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 ITGAMP11215 1152 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 PIM1P11309 404 aaPredicted RBP6.58□□□□□ -1.36
TPM4-210ENST00000588507 SERPINA4P29622 427 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 LMAN1P49257 510 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 CARSP49589 748 aaKnown RBP6.58□□□□□ -1.36
TPM4-210ENST00000588507 AP2B1P63010 937 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 TUBA3CQ13748 450 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 MESDQ14696 234 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 OR1C1Q15619 314 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 OCLNQ16625 522 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 SLC5A12Q1EHB4 618 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 ACBD5Q5T8D3 534 aaPredicted RBP6.58□□□□□ -1.36
TPM4-210ENST00000588507 SPINK14Q6IE38 97 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 SLC25A25Q6KCM7 469 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 ZNF585AQ6P3V2 769 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 TUBA3EQ6PEY2 450 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 CNSTQ6PJW8 725 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 UNC5DQ6UXZ4 953 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 PLEKHM3Q6ZWE6 761 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 SV2BQ7L1I2 683 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 BTLAQ7Z6A9 289 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 C12orf56Q8IXR9 622 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 DEFB106AQ8N104 65 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 RELL2Q8NC24 303 aaPredicted RBP6.58□□□□□ -1.36
TPM4-210ENST00000588507 EXD1Q8NHP7 514 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 GPT2Q8TD30 523 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 TAS1R2Q8TE23 839 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 N4BP2L2Q92802 583 aaPredicted RBP6.58□□□□□ -1.36
TPM4-210ENST00000588507 C8orf44Q96CB5 159 aa6.58□□□□□ -1.36
TPM4-210ENST00000588507 AP2M1Q96CW1 435 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms