RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 K7ESM1 405 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 NUAK1O60285 661 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 SNX2O60749 519 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 CLCQ05315 142 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 LCP2Q13094 533 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 PHKG1Q16816 387 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 LSM12Q3MHD2 195 aaKnown RBP20.05■□□□□ 0.8
ATG4D-204ENST00000586417 METTL21CQ5VZV1 264 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 FRA10AC1Q70Z53 315 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 FRMD1Q8N878 549 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 TMEM105Q8N8V8 129 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 OR14C36Q8NHC7 312 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 CXorf40AQ8TE69 158 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 TRPC4APQ8TEL6 797 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 KLHL29Q96CT2 875 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 NSL1Q96IY1 281 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 PPP1R36Q96LQ0 422 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 TUBB6Q9BUF5 446 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 ZBTB26Q9HCK0 441 aa20.05■□□□□ 0.8
ATG4D-204ENST00000586417 PRR5-ARHGAP8B1AHC4 643 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 E9PBE3 544 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 SDHDO14521 159 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 INPP4BO15327 924 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 FFAR2O15552 330 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 AP1G1O43747 822 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 LZTS3O60299 673 aaPredicted RBP20.04■□□□□ 0.8
ATG4D-204ENST00000586417 KLHL41O60662 606 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 FGF4P08620 206 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 ACSL1P33121 698 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 CTSCP53634 463 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 ADPRHP54922 357 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 NAA20P61599 178 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 ARHGAP8P85298 464 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 BTKQ06187 659 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 TBCCQ15814 346 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 UGT3A2Q3SY77 523 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 PLEKHS1Q5SXH7 462 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 USP30Q70CQ3 517 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 NLRP8Q86W28 1048 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 PHYKPLQ8IUZ5 450 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 VRK3Q8IV63 474 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 KIRREL3Q8IZU9 778 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 BEND7Q8N7W2 519 aaPredicted RBP20.04■□□□□ 0.8
ATG4D-204ENST00000586417 AGAP11Q8TF27 550 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 RLN3Q8WXF3 142 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 CCDC28BQ9BUN5 200 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 SPATA6Q9NWH7 488 aaPredicted RBP20.04■□□□□ 0.8
ATG4D-204ENST00000586417 USP36Q9P275 1121 aaKnown RBP20.04■□□□□ 0.8
ATG4D-204ENST00000586417 CDYLQ9Y232 598 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 FIS1Q9Y3D6 152 aa20.04■□□□□ 0.8
ATG4D-204ENST00000586417 A0A1B0GTL3 188 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 PRR23AA6NEV1 266 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 OR2AG2A6NM03 316 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 TRPC5OSA6NMA1 111 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 QSOX1O00391 747 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 E2F3O00716 465 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 RAD51BO15315 384 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 PLRG1O43660 514 aaKnown RBP20.03■□□□□ 0.8
ATG4D-204ENST00000586417 APBB3O95704 486 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 INHBCP55103 352 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 KCNJ2P63252 427 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 HSPA14Q0VDF9 509 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 TMEM115Q12893 351 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-204ENST00000586417 CLEC6AQ6EIG7 209 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 TSSK4Q6SA08 328 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 KIF2BQ8N4N8 673 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 AFAP1L2Q8N4X5 818 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 ESAMQ96AP7 390 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 MEAF6Q9HAF1 191 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 RDH14Q9HBH5 336 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 MID1IP1Q9NPA3 183 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 EIF2B4Q9UI10 523 aaKnown RBP20.03■□□□□ 0.8
ATG4D-204ENST00000586417 FZD4Q9ULV1 537 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 CYP8B1Q9UNU6 501 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 NCKAP1Q9Y2A7 1128 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 EML5Q05BV3 1969 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 CFAP73A6NFT4 308 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 HNRNPCL1O60812 293 aaKnown RBP20.03■□□□□ 0.8
ATG4D-204ENST00000586417 SKAP2O75563 359 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-204ENST00000586417 PCDH8O95206 1070 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 FTH1P02794 183 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 CALB2P22676 271 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 PRLHRP49683 370 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 DMWDQ09019 674 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 BOP1Q14137 746 aaKnown RBP20.03■□□□□ 0.8
ATG4D-204ENST00000586417 PCBP2Q15366 365 aaKnown RBP eCLIP20.03■□□□□ 0.8
ATG4D-204ENST00000586417 C18orf21Q32NC0 220 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-204ENST00000586417 ACAD11Q709F0 780 aa20.03■□□□□ 0.8
ATG4D-204ENST00000586417 FAM160A2Q8N612 972 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-204ENST00000586417 SEMA4BQ9NPR2 832 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-204ENST00000586417 PTBP2Q9UKA9 531 aaKnown RBP20.03■□□□□ 0.8
ATG4D-204ENST00000586417 KPNA5O15131 536 aa20.02■□□□□ 0.8
ATG4D-204ENST00000586417 TAPBPO15533 448 aa20.02■□□□□ 0.8
ATG4D-204ENST00000586417 GPC4O75487 556 aa20.02■□□□□ 0.8
ATG4D-204ENST00000586417 MPC1LP0DKB6 136 aa20.02■□□□□ 0.8
ATG4D-204ENST00000586417 NCF2P19878 526 aaPredicted RBP20.02■□□□□ 0.8
ATG4D-204ENST00000586417 MAGEA9P43362 315 aa20.02■□□□□ 0.8
ATG4D-204ENST00000586417 CCR3P51677 355 aa20.02■□□□□ 0.8
ATG4D-204ENST00000586417 KANK2Q63ZY3 851 aa20.02■□□□□ 0.8
ATG4D-204ENST00000586417 RAET1GQ6H3X3 334 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms