RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 OPTCQ9UBM4 332 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 MARCOQ9UEW3 520 aaPredicted RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 DCTN4Q9UJW0 460 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 DMTF1Q9Y222 760 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 CDYLQ9Y232 598 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 DNAJC16Q9Y2G8 782 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 DNMT3AQ9Y6K1 912 aaPredicted RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 TMEM131Q92545 1883 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 TRIOBPQ9H2D6 2365 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 TNRC6BQ9UPQ9 1833 aaKnown RBP6.07□□□□□ -1.44
LIG3-206ENST00000586058 FAM170BA6NMN3 283 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 MEI4A8MW99 385 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 CDC7O00311 574 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 SPINT1O43278 529 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 GRID2O43424 1007 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 DLX3O60479 287 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 CCNT2O60583 730 aaKnown RBP6.07□□□□□ -1.44
LIG3-206ENST00000586058 HNRNPCL1O60812 293 aaKnown RBP6.07□□□□□ -1.44
LIG3-206ENST00000586058 DIAPH2O60879 1101 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 WISP3O95389 354 aaPredicted RBP6.07□□□□□ -1.44
LIG3-206ENST00000586058 APBB3O95704 486 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 GUCA1CO95843 209 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 OTCP00480 354 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 EPB42P16452 691 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 CD6P30203 668 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 HMOX2P30519 316 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 MAT2AP31153 395 aaKnown RBP6.07□□□□□ -1.44
LIG3-206ENST00000586058 CCR7P32248 378 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 RPIAP49247 311 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 RASSF2P50749 326 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 TPMTP51580 245 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 CCNG1P51959 295 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 AQP5P55064 265 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 PKNOX1P55347 436 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 STARD6P59095 220 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 TAS2R38P59533 333 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 KIAA1024LP59773 190 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 STX1BP61266 288 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 CDKL1Q00532 357 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 TFF2Q03403 129 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 LCP2Q13094 533 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 RPA4Q13156 261 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 KRT33BQ14525 404 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 INPP5AQ14642 412 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 OR4D1Q15615 310 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 ZNF678Q5SXM1 525 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 UNC5DQ6UXZ4 953 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 RFLNAQ6ZTI6 216 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 LPCAT2Q7L5N7 544 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 LRRC70Q7Z2Q7 622 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 TRPM8Q7Z2W7 1104 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 PIGWQ7Z7B1 504 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 AMZ2Q86W34 360 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 GJD3Q8N144 294 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 CHCHD4Q8N4Q1 142 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 RASGEF1AQ8N9B8 481 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 PDPRQ8NCN5 879 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 CFAP61Q8NHU2 1237 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 GIMAP7Q8NHV1 300 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 AGR3Q8TD06 166 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 FOXJ1Q92949 421 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 FUBP1Q96AE4 644 aaKnown RBP6.07□□□□□ -1.44
LIG3-206ENST00000586058 SKA1Q96BD8 255 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 PTERQ96BW5 349 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 THOC1Q96FV9 657 aaKnown RBP6.07□□□□□ -1.44
LIG3-206ENST00000586058 WDR92Q96MX6 357 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 GPR78Q96P69 363 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 TIMM29Q9BSF4 260 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 GATA5Q9BWX5 397 aaPredicted RBP6.07□□□□□ -1.44
LIG3-206ENST00000586058 RAB11FIP5Q9BXF6 653 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 C1QTNF2Q9BXJ5 285 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 OSBPL6Q9BZF3 934 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 DPEP2Q9H4A9 486 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 OSGEPL1Q9H4B0 414 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 COG4Q9H9E3 785 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 TBC1D17Q9HA65 648 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 PARVBQ9HBI1 364 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 MID1IP1Q9NPA3 183 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 TXLNGQ9NUQ3 528 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 SERGEFQ9UGK8 458 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 ZNHIT2Q9UHR6 403 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 ZFP69BQ9UJL9 534 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 CYP8B1Q9UNU6 501 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 FIS1Q9Y3D6 152 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 PRSS21Q9Y6M0 314 aa6.07□□□□□ -1.44
LIG3-206ENST00000586058 TDRD6O60522 2096 aaKnown RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 MGAT4DA6NG13 374 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 PDZK1P1A8MUH7 402 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 TARM1B6A8C7 271 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 PRAMEF26H0Y7S4 382 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 HDAC3O15379 428 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 SLC31A1O15431 190 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 VPS4BO75351 444 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 SKAP2O75563 359 aaPredicted RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 LYPLA1O75608 230 aaPredicted RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 ATP5HO75947 161 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 FSBPO95073 299 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 PAK4O96013 591 aaPredicted RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 CHRNB1P11230 501 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms