RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 T-ENOLP0DO92 83 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 EZRP15311 586 aaKnown RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 ETV3P41162 512 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 PXNP49023 591 aaPredicted RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 INHBCP55103 352 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 PKNOX1P55347 436 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 CDKL1Q00532 357 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 B4GALNT1Q00973 533 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 SEMG2Q02383 582 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 PLOD1Q02809 727 aaPredicted RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 CLCQ05315 142 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 MESP2Q0VG99 397 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 GRSF1Q12849 480 aaKnown RBP eCLIP10.21□□□□□ -0.77
LIG3-203ENST00000585370 LCP2Q13094 533 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 SP140Q13342 867 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 TUBB3Q13509 450 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 GBX1Q14549 363 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 TGFBIQ15582 683 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 EGFLAMQ63HQ2 1017 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 NAIF1Q69YI7 327 aaPredicted RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 SULT1C3Q6IMI6 304 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 CYHR1Q6ZMK1 362 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 ATG14Q6ZNE5 492 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 PRR23CQ6ZRP0 262 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 RFLNAQ6ZTI6 216 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 MAVSQ7Z434 540 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 WDR5BQ86VZ2 330 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 MMAAQ8IVH4 418 aaKnown RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 CHPFQ8IZ52 775 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 TCAIMQ8N3R3 496 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 CLDN19Q8N6F1 224 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 ZNF366Q8N895 744 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 ZNF513Q8N8E2 541 aaPredicted RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 PDPRQ8NCN5 879 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 OR56A4Q8NGH8 313 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 NETO1Q8TDF5 533 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 CXorf40AQ8TE69 158 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 ASZ1Q8WWH4 475 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 FAM136AQ96C01 138 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 CMTM5Q96DZ9 223 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 ZNF514Q96K75 400 aaPredicted RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 CNTNAP3BQ96NU0 1288 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 EBF4Q9BQW3 602 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 CCDC106Q9BWC9 280 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 CNTNAP3Q9BZ76 1288 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 RSPH9Q9H1X1 276 aaPredicted RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 RASSF4Q9H2L5 321 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 MEAF6Q9HAF1 191 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 TAGLN3Q9UI15 199 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 SCML1Q9UN30 329 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 ANKRD65E5RJM6 399 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 SLC30A4O14863 429 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 HGSO14964 777 aaPredicted RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 GPR39O43194 453 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 RECQL5O94762 991 aaPredicted RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 NQO1P15559 274 aaKnown RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 VCLP18206 1134 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 DRD1P21728 446 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 EEF1DP29692 281 aaKnown RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 NTSR1P30989 418 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 CA5AP35218 305 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 PIK3CGP48736 1102 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 TMEM115Q12893 351 aaPredicted RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 STARD3Q14849 445 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 AGERQ15109 404 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 ZRSR2Q15696 482 aaKnown RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 SPRED3Q2MJR0 410 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 ACSBG2Q5FVE4 666 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 LRRC73Q5JTD7 316 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 ZNF776Q68DI1 518 aaPredicted RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 CEP68Q76N32 757 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 PHYKPLQ8IUZ5 450 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 ARHGAP24Q8N264 748 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 CPSF7Q8N684 471 aaKnown RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 OR2T3Q8NH03 318 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 ZNF483Q8TF39 744 aaPredicted RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 EXT2Q93063 718 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 SCAMP4Q969E2 229 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 NUS1Q96E22 293 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 PTCD3Q96EY7 689 aaKnown RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 MAELQ96JY0 434 aaKnown RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 BTBD10Q9BSF8 475 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 CCM2Q9BSQ5 444 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 NUSAP1Q9BXS6 441 aaKnown RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 MMADHCQ9H3L0 296 aaPredicted RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.2□□□□□ -0.78
LIG3-203ENST00000585370 CD84Q9UIB8 345 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 PTBP2Q9UKA9 531 aaKnown RBP10.2□□□□□ -0.78
LIG3-203ENST00000585370 TMPRSS11EQ9UL52 423 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 FADS3Q9Y5Q0 445 aa10.2□□□□□ -0.78
LIG3-203ENST00000585370 SCN8AQ9UQD0 1980 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 FRYQ5TBA9 3013 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 CEP295Q9C0D2 2601 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 CCDC163A0A0D9SF12 145 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 KLHL33A6NCF5 533 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 K7EQS6 105 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 AZIN1O14977 448 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 AXIN1O15169 862 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 FFAR2O15552 330 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 VEGFDO43915 354 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms