RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 TFB2MQ9H5Q4 396 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-222ENST00000581708 FAM96AQ9H5X1 160 aa12.28□□□□□ -0.44
CDK5RAP3-222ENST00000581708 PDE7BQ9NP56 450 aa12.28□□□□□ -0.44
CDK5RAP3-222ENST00000581708 HRASLS2Q9NWW9 162 aa12.28□□□□□ -0.44
CDK5RAP3-222ENST00000581708 SMARCAL1Q9NZC9 954 aa12.28□□□□□ -0.44
CDK5RAP3-222ENST00000581708 BFARQ9NZS9 450 aa12.28□□□□□ -0.44
CDK5RAP3-222ENST00000581708 TTC7AQ9ULT0 858 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-222ENST00000581708 TCAF1Q9Y4C2 921 aa12.28□□□□□ -0.44
CDK5RAP3-222ENST00000581708 PCDHGA4Q9Y5G9 962 aa12.28□□□□□ -0.44
CDK5RAP3-222ENST00000581708 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 CCDC162PA2VCL2 907 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 AGRPO00253 132 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 CCL22O00626 93 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 KDM1AO60341 852 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 STK17BO94768 372 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 DLGAP3O95886 979 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 MT-ND3P03897 115 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 POLBP06746 335 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TPSB2P20231 275 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 CDKN1CP49918 316 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 HSD11B2P80365 405 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SARNPP82979 210 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 MC1RQ01726 317 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PRKAA1Q13131 559 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TPSAB1Q15661 275 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 DNTTIP2Q5QJE6 756 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PCSK4Q6UW60 755 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 MPP5Q8N3R9 675 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TAB3Q8N5C8 712 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 CLDN19Q8N6F1 224 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 OR4L1Q8NH43 312 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 HDAC10Q969S8 669 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PMEPA1Q969W9 287 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 MED8Q96G25 268 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SLC45A3Q96JT2 553 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 CATSPER2Q96P56 530 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 OR6C1Q96RD1 312 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TSSK1BQ9BXA7 367 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 GRPEL1Q9HAV7 217 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SYTL2Q9HCH5 934 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 ANAPC5Q9UJX4 755 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 HELZ2Q9BYK8 2649 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 GCN1Q92616 2671 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 COL6A6A6NMZ7 2263 aa12.27□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PIKFYVEQ9Y2I7 2098 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 UBA6A0AVT1 1052 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 ZNF891A8MT65 544 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 ZSCAN12O43309 604 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 ZBTB11O95625 1053 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 RECKO95980 971 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 MSL3P1P0C860 447 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 ETS1P14921 441 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 MAGEA6P43360 314 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TTPAP49638 278 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 ARL4DP49703 201 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PRAMEP78395 509 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 FOXM1Q08050 763 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 BOP1Q14137 746 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 CCDC38Q502W7 563 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 FASTKD1Q53R41 847 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TMTC4Q5T4D3 741 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 FAM92BQ6ZTR7 304 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 VASH2Q86V25 355 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 LRRC6Q86X45 466 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PPP1R3BQ86XI6 285 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 RASGEF1CQ8N431 466 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PRELID2Q8N945 189 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SIDT2Q8NBJ9 832 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 LCN9Q8WX39 176 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TFGQ92734 400 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 CTRCQ99895 268 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 ULBP3Q9BZM4 244 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SRMSQ9H3Y6 488 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 MRM3Q9HC36 420 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 APMAPQ9HDC9 416 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 C1GALT1Q9NS00 363 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PIH1D1Q9NWS0 290 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 POLG2Q9UHN1 485 aa12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 CFAP20Q9Y6A4 193 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TLN1Q9Y490 2541 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-222ENST00000581708 ZNF462Q96JM2 2506 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 IGHV5-51A0A0C4DH38 117 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 OR6C74A6NCV1 312 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 CES2O00748 559 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PFDN6O15212 129 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 MAP3K7O43318 606 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 KIF1CO43896 1103 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 GOT2P00505 430 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 ZSCAN5DPP0CG00 497 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 LIFP15018 202 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 STAT5AP42229 794 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 GRIA1P42261 906 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SEPHS1P49903 392 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 BASP1P80723 227 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 LRRC8BQ6P9F7 803 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 C6orf15Q6UXA7 325 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TBC1D21Q8IYX1 336 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 D2HGDHQ8N465 521 aa12.25□□□□□ -0.45
CDK5RAP3-222ENST00000581708 GLIS1Q8NBF1 620 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms