RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PDP2Q9P2J9 529 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 POMPQ9Y244 141 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AK5Q9Y6K8 562 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 IGLON5A6NGN9 336 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 OR2AG2A6NM03 316 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AGAP14A8MT82 685 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 WNT9AO14904 365 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 LZTS3O60299 673 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SLC25A14O95258 325 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RPS14P62263 151 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TDGQ13569 410 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 HENMT1Q5T8I9 393 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AGBL4Q5VU57 503 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 DSG4Q86SJ6 1040 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ISCA2Q86U28 154 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CUZD1Q86UP6 607 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CD200R1Q8TD46 325 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PLEKHG4BQ96PX9 1271 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 COPS8Q99627 209 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FAM192AQ9GZU8 254 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 EML4Q9HC35 981 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FBXL12Q9NXK8 326 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FADS3Q9Y5Q0 445 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TRPC5OSA6NMA1 111 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CDC7O00311 574 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ZNF7P17097 686 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AKT1P31749 480 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PPARGP37231 505 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CLCN7P51798 805 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CDH13P55290 713 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 DNAJB13P59910 316 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AP2B1P63010 937 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 OR4D1Q15615 310 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 LEXMQ3ZCV2 418 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SFT2D3Q587I9 215 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CLEC6AQ6EIG7 209 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SDE2Q6IQ49 451 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CERS6Q6ZMG9 384 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RBFAQ8N0V3 343 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AFAP1L2Q8N4X5 818 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 DRAXINQ8NBI3 349 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PLA2G15Q8NCC3 412 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 VPS13AQ96RL7 3174 aa12.47□□□□□ -0.41
CDK5RAP3-217ENST00000580287 WDFY4Q6ZS81 3184 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 F8W8V4 182 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RNASEH1O60930 286 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 LYNP07948 512 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 THRAP10827 490 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 MAT2AP31153 395 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 HK2P52789 917 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CCINQ13939 588 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 GSTA3Q16772 222 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PFKFB4Q16877 469 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 C4orf46Q504U0 113 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SLC22A9Q8IVM8 553 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 HCAR2Q8TDS4 363 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 COQ10AQ96MF6 247 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 C8orf33Q9H7E9 229 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 S100A14Q9HCY8 104 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TRPV5Q9NQA5 729 aa12.46□□□□□ -0.41
CDK5RAP3-217ENST00000580287 UBXN8O00124 270 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SIX3O95343 332 aaPredicted RBP12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PAK4O96013 591 aaPredicted RBP12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SOD1P00441 154 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ESR1P03372 595 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GFAPP14136 432 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CD1DP15813 335 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DRD1P21728 446 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SUOXP51687 545 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CYLC2Q14093 348 aaPredicted RBP12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TSNQ15631 228 aaKnown RBP12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GPR33Q49SQ1 333 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FAM46CQ5VWP2 391 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PTGR2Q8N8N7 351 aaPredicted RBP12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 OR2T3Q8NH03 318 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 OR14C36Q8NHC7 312 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 B4GALNT2Q8NHY0 566 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DTD2Q96FN9 168 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NR1H4Q96RI1 486 aaPredicted RBP12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GABRG3Q99928 467 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MYOCQ99972 504 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZDHHC3Q9NYG2 299 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 UTP6Q9NYH9 597 aaKnown RBP12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TRMT6Q9UJA5 497 aaKnown RBP12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 OAS3Q9Y6K5 1087 aaKnown RBP12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LAMA1P25391 3075 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GON4LQ3T8J9 2241 aa12.46□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ATP6AP2A0A1C7CYW4 349 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RGSL1A5PLK6 1076 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LRRC14BA6NHZ5 514 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NCF1BA6NI72 391 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NCF1CA8MVU1 366 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 VPS26AO75436 327 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ATP6AP2O75787 350 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TSPAN12O95859 305 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SRFP11831 508 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ENO3P13929 434 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NCF1P14598 390 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GSTT1P30711 240 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms