RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 OR2AG2A6NM03 316 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 CFAP99D6REC4 459 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 CCL22O00626 93 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 POP7O75817 140 aaKnown RBP15.67■□□□□ 0.1
VAPA-204ENST00000577901 ANKRD34CP0C6C1 535 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 IDSP22304 550 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 CA5AP35218 305 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 NPY2RP49146 381 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 FNTAP49354 379 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 CACNG1Q06432 222 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 GPS1Q13098 491 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 MAP7Q14244 749 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 CRTC2Q53ET0 693 aaPredicted RBP15.67■□□□□ 0.1
VAPA-204ENST00000577901 LACTB2Q53H82 288 aaPredicted RBP15.67■□□□□ 0.1
VAPA-204ENST00000577901 FNBP1LQ5T0N5 605 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 ATP1A1-AS1Q5TC04 95 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 PAPD7Q5XG87 772 aaKnown RBP15.67■□□□□ 0.1
VAPA-204ENST00000577901 TAS2R42Q7RTR8 314 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 NXPE1Q8N323 547 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 PPHLN1Q8NEY8 458 aaKnown RBP15.67■□□□□ 0.1
VAPA-204ENST00000577901 PRDM8Q9NQV8 689 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 SIDT1Q9NXL6 827 aaKnown RBP15.67■□□□□ 0.1
VAPA-204ENST00000577901 SMARCAL1Q9NZC9 954 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 BFARQ9NZS9 450 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 RIMKLBQ9ULI2 386 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 SAR1BQ9Y6B6 198 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.67■□□□□ 0.15e-10■□□□□ 10.2
VAPA-204ENST00000577901 RPS6KL1Q9Y6S9 549 aa15.67■□□□□ 0.1
VAPA-204ENST00000577901 MN1Q10571 1320 aaPredicted RBP15.67■□□□□ 0.1
VAPA-204ENST00000577901 CCDC78A2IDD5 438 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 KLHL33A6NCF5 533 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 LILRA5A6NI73 299 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 PRR19A6NJB7 356 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 PDZK1P1A8MUH7 402 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 TPSB2P20231 275 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 PSMA3P25788 255 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 VPS41P49754 854 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 GFERP55789 205 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 SESN2P58004 480 aaPredicted RBP15.66■□□□□ 0.1
VAPA-204ENST00000577901 UBE2IP63279 158 aaKnown RBP15.66■□□□□ 0.1
VAPA-204ENST00000577901 FOXM1Q08050 763 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 TPSAB1Q15661 275 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 PCID2Q5JVF3 399 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 TSTD2Q5T7W7 516 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 DET1Q7L5Y6 550 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 C11orf96Q7Z7L8 435 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 PEX13Q92968 403 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 C9orf72Q96LT7 481 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 TTC1Q99614 292 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 ULBP3Q9BZM4 244 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 IL22Q9GZX6 179 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 UCK1Q9HA47 277 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 KCND1Q9NSA2 647 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 ZDHHC3Q9NYG2 299 aa15.66■□□□□ 0.1
VAPA-204ENST00000577901 MRPS18BQ9Y676 258 aaKnown RBP15.66■□□□□ 0.1
VAPA-204ENST00000577901 ATP1B2P14415 290 aaPredicted RBP15.65■□□□□ 0.1
VAPA-204ENST00000577901 ZNF28P17035 718 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 TYRP1P17643 537 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 F8A1P23610 371 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 ACRV1P26436 265 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 DLSTP36957 453 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 HALP42357 657 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 CTSCP53634 463 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 DMPKQ09013 629 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 AGAP9Q5VTM2 703 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 LRRC8BQ6P9F7 803 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 ABRAXAS1Q6UWZ7 409 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 WASH2PQ6VEQ5 465 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 SERPINA9Q86WD7 417 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.65■□□□□ 0.1
VAPA-204ENST00000577901 RNF31Q96EP0 1072 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 TGM7Q96PF1 710 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 WASH6PQ9NQA3 447 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 OGFRQ9NZT2 677 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 SCHIP1Q9P0W5 487 aaPredicted RBP15.65■□□□□ 0.1
VAPA-204ENST00000577901 TCAF1Q9Y4C2 921 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 KCNMB2Q9Y691 235 aa15.65■□□□□ 0.1
VAPA-204ENST00000577901 ZNF106Q9H2Y7 1883 aaKnown RBP15.65■□□□□ 0.1
VAPA-204ENST00000577901 TRBV5-4A0A0C4DH59 114 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 CCDC162PA2VCL2 907 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 CLEC18AA5D8T8 446 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 MGAT4DA6NG13 374 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 UBXN7O94888 489 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 VIPP01282 170 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 C9P02748 559 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 XRCC1P18887 633 aaPredicted RBP15.64■□□□□ 0.09
VAPA-204ENST00000577901 RPL10P27635 214 aaKnown RBP15.64■□□□□ 0.09
VAPA-204ENST00000577901 PAFAH1B1P43034 410 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 MAGEA6P43360 314 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 CDKN1CP49918 316 aaPredicted RBP15.64■□□□□ 0.09
VAPA-204ENST00000577901 TERF1P54274 439 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 PRAMEP78395 509 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 KLRB1Q12918 225 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 PPP1R7Q15435 360 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 SEPT7Q16181 437 aaKnown RBP15.64■□□□□ 0.09
VAPA-204ENST00000577901 BCL7AQ4VC05 210 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 LYPLAL1Q5VWZ2 237 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 AFTPHQ6ULP2 937 aa15.64■□□□□ 0.09
VAPA-204ENST00000577901 C6orf15Q6UXA7 325 aaPredicted RBP15.64■□□□□ 0.09
VAPA-204ENST00000577901 CLEC18BQ6UXF7 455 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms