RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 MTRF1LQ9UGC7 380 aaKnown RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 DNMT3AQ9Y6K1 912 aaPredicted RBP8.91□□□□□ -0.98
NDE1-207ENST00000573203 SLC30A1Q9Y6M5 507 aa8.91□□□□□ -0.98
NDE1-207ENST00000573203 PRAMEF33A0A0G2JMD5 474 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 ESYT3A0FGR9 886 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 PRR19A6NJB7 356 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 OR52A4PA6NMU1 304 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 ERI2A8K979 691 aaKnown RBP8.9□□□□□ -0.98
NDE1-207ENST00000573203 A8MU76 341 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 CFAP99D6REC4 459 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 GOLGA8KD6RF30 607 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 CCL22O00626 93 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 LDB2O43679 373 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 PRAMEF10O60809 474 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 SYF2O95926 243 aaKnown RBP8.9□□□□□ -0.98
NDE1-207ENST00000573203 CCL4P13236 92 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 BRAFP15056 766 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 TYRP1P17643 537 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 AMD1P17707 334 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 MC4RP32245 332 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 TMPRSS3P57727 454 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 CXADRP78310 365 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 MRPS25P82663 173 aaKnown RBP8.9□□□□□ -0.98
NDE1-207ENST00000573203 DMPKQ09013 629 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 CALCOCO2Q13137 446 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 NFE2L1Q14494 772 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 ZRANB3Q5FWF4 1079 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 ZDHHC24Q6UX98 284 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 PPP1R21Q6ZMI0 780 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 TMEM26Q6ZUK4 368 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 SNX20Q7Z614 316 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 BEND7Q8N7W2 519 aaPredicted RBP8.9□□□□□ -0.98
NDE1-207ENST00000573203 OR52K1Q8NGK4 314 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 STYXQ8WUJ0 223 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 SGF29Q96ES7 293 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 DNAJC1Q96KC8 554 aaKnown RBP8.9□□□□□ -0.98
NDE1-207ENST00000573203 FCRL3Q96P31 734 aaPredicted RBP8.9□□□□□ -0.98
NDE1-207ENST00000573203 TAAR9Q96RI9 348 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 COPS8Q99627 209 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 TMEM109Q9BVC6 243 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 PHACTR1Q9C0D0 580 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 FAM96AQ9H5X1 160 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 PRORYQ9H606 182 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 UCK1Q9HA47 277 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 ETNK1Q9HBU6 452 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 NLE1Q9NVX2 485 aaPredicted RBP8.9□□□□□ -0.98
NDE1-207ENST00000573203 PSD3Q9NYI0 1048 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 PAK5Q9P286 719 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 ZNF624Q9P2J8 865 aaPredicted RBP8.9□□□□□ -0.98
NDE1-207ENST00000573203 KLHL3Q9UH77 587 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 PSMD13Q9UNM6 376 aa8.9□□□□□ -0.98
NDE1-207ENST00000573203 PTPRQQ9UMZ3 2332 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 CCDC78A2IDD5 438 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 KLHL33A6NCF5 533 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 MGAT4DA6NG13 374 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 EFCAB7A8K855 629 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 AGAP14A8MT82 685 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 C9orf172C9J069 976 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 TP73O15350 636 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 UBXN7O94888 489 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 NUDT17P0C025 328 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 FGF3P11487 239 aaPredicted RBP8.89□□□□□ -0.99
NDE1-207ENST00000573203 ETS1P14921 441 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 RPL21P46778 160 aaKnown RBP8.89□□□□□ -0.99
NDE1-207ENST00000573203 KCNJ1P48048 391 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 CBX1P83916 185 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 CDH17Q12864 832 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 CLN3Q13286 438 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 CLCA4Q14CN2 919 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 PPP1R7Q15435 360 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 SKIDA1Q1XH10 827 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 GPR33Q49SQ1 333 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 C4orf22Q6V702 233 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 FAM83HQ6ZRV2 1179 aaPredicted RBP8.89□□□□□ -0.99
NDE1-207ENST00000573203 TRMT10CQ7L0Y3 403 aaKnown RBP8.89□□□□□ -0.99
NDE1-207ENST00000573203 TAS2R42Q7RTR8 314 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 GSTA5Q7RTV2 222 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 GPR155Q7Z3F1 870 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 PRUNE1Q86TP1 453 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 FAM129CQ86XR2 697 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 PLXDC1Q8IUK5 500 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 RBM12BQ8IXT5 1001 aaKnown RBP8.89□□□□□ -0.99
NDE1-207ENST00000573203 NXPE1Q8N323 547 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 OR2L2Q8NH16 312 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 NAT14Q8WUY8 206 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 HEXDCQ8WVB3 486 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 SNF8Q96H20 258 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 CDKN2AIPNLQ96HQ2 116 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 TRIM51Q9BSJ1 452 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 CPNE5Q9HCH3 593 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 SLC40A1Q9NP59 571 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 RAB6BQ9NRW1 208 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 SLC39A1Q9NY26 324 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 FOXJ2Q9P0K8 574 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 PDP2Q9P2J9 529 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 FAM8A1Q9UBU6 413 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 ACSL6Q9UKU0 697 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 WDR37Q9Y2I8 494 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 SNX24Q9Y343 169 aa8.89□□□□□ -0.99
NDE1-207ENST00000573203 NFS1Q9Y697 457 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms