RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 ADCY2Q08462 1091 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 KRT33BQ14525 404 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 GSE1Q14687 1217 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 PDK1Q15118 436 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 LONRF2Q1L5Z9 754 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 CRB2Q5IJ48 1285 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 ZNF385CQ66K41 422 aaPredicted RBP19.27■□□□□ 0.68
CCDC40-206ENST00000572083 SLC9A4Q6AI14 798 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 ALKBH5Q6P6C2 394 aaKnown RBP19.27■□□□□ 0.68
CCDC40-206ENST00000572083 IGFL3Q6UXB1 125 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 SPOCD1Q6ZMY3 1216 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 GLT6D1Q7Z4J2 308 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 CUZD1Q86UP6 607 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 SLC34A3Q8N130 599 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 LILRA3Q8N6C8 439 aaPredicted RBP19.27■□□□□ 0.68
CCDC40-206ENST00000572083 BLOC1S5Q8TDH9 187 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 ZFPM2Q8WW38 1151 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 NRTNQ99748 197 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 TRABDQ9H4I3 376 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 ZBTB20Q9HC78 741 aaPredicted RBP19.27■□□□□ 0.68
CCDC40-206ENST00000572083 ACSL5Q9ULC5 683 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 PCDHGA10Q9Y5H3 936 aa19.27■□□□□ 0.68
CCDC40-206ENST00000572083 BZW2Q9Y6E2 419 aaKnown RBP19.27■□□□□ 0.68
CCDC40-206ENST00000572083 A0A1B0GTH6 734 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 MGAT4DA6NG13 374 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 APOL1O14791 398 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 POLBP06746 335 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 PVRP15151 417 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 AGXTP21549 392 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 TYRO3Q06418 890 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 ITGA9Q13797 1035 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 TEX44Q53QW1 395 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 SIRPB2Q5JXA9 342 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 DCAF10Q5QP82 559 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 MLIPQ5VWP3 458 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 ZDHHC20Q5W0Z9 365 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 DAAM2Q86T65 1068 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 OR2L2Q8NH16 312 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 DTX3LQ8TDB6 740 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 FER1L6-AS2Q96M78 137 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 BARD1Q99728 777 aaKnown RBP19.26■□□□□ 0.67
CCDC40-206ENST00000572083 DPH2Q9BQC3 489 aaPredicted RBP19.26■□□□□ 0.67
CCDC40-206ENST00000572083 DHRS4Q9BTZ2 278 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 SYTL2Q9HCH5 934 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 SERTAD3Q9UJW9 196 aa19.26■□□□□ 0.67
CCDC40-206ENST00000572083 PTRH2Q9Y3E5 179 aaKnown RBP19.26■□□□□ 0.67
CCDC40-206ENST00000572083 FER1L5A0AVI2 2057 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 LRRTM2O43300 516 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 HNRNPRO43390 633 aaKnown RBP19.25■□□□□ 0.67
CCDC40-206ENST00000572083 SERPING1P05155 500 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 MSL3P1P0C860 447 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 PTPN3P26045 913 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 PRDX3P30048 256 aaKnown RBP19.25■□□□□ 0.67
CCDC40-206ENST00000572083 FOXL2P58012 376 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 PTPRCAPQ14761 206 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 ANO6Q4KMQ2 910 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 C1orf189Q5VU69 101 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 Q6ZS92 163 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 CDHR3Q6ZTQ4 885 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 ZADH2Q8N4Q0 377 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 ST6GALNAC3Q8NDV1 305 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 LCN9Q8WX39 176 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 IP6K3Q96PC2 410 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 UNKQ9C0B0 810 aaKnown RBP19.25■□□□□ 0.67
CCDC40-206ENST00000572083 SRMSQ9H3Y6 488 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 DEF6Q9H4E7 631 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.25■□□□□ 0.67
CCDC40-206ENST00000572083 TMEM63CQ9P1W3 806 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 FAM153AQ9UHL3 310 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 PKP3Q9Y446 797 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 CSAG2Q9Y5P2 127 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 COLEC10Q9Y6Z7 277 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 ADGRG4Q8IZF6 3080 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 POLEQ07864 2286 aa19.25■□□□□ 0.67
CCDC40-206ENST00000572083 CELSR1Q9NYQ6 3014 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 LOC285095A0A1B0GVY8 99 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 C3orf70A6NLC5 250 aaPredicted RBP19.24■□□□□ 0.67
CCDC40-206ENST00000572083 MATN2O00339 956 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 BTN3A3O00478 584 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 BTN3A1O00481 513 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 PEX12O00623 359 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 CBSLP0DN79 551 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 NDUFS1P28331 727 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 CD68P34810 354 aaPredicted RBP19.24■□□□□ 0.67
CCDC40-206ENST00000572083 CBSP35520 551 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 FOLR3P41439 243 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 WNT3AP56704 352 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 DYNLT1P63172 113 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 SSPNQ14714 243 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 NAA30Q147X3 362 aaPredicted RBP19.24■□□□□ 0.67
CCDC40-206ENST00000572083 SLC9A5Q14940 896 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 KDELC1Q6UW63 502 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 ACVR1CQ8NER5 493 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 TM9SF4Q92544 642 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 TEKT5Q96M29 485 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 PITPNM3Q9BZ71 974 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 AGPAT4Q9NRZ5 378 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 SMOXQ9NWM0 555 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 P4HTMQ9NXG6 502 aa19.24■□□□□ 0.67
CCDC40-206ENST00000572083 DIDO1Q9BTC0 2240 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms