RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 RORAP35398 523 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 SPAM1P38567 509 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 RPL7AP62424 266 aaKnown RBP9.44□□□□□ -0.9
CAPN3-216ENST00000567071 ARG2P78540 354 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 SLC6A3Q01959 620 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 DPTQ07507 201 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 MAMLD1Q13495 774 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 PTCHD3Q3KNS1 767 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 DNTTIP2Q5QJE6 756 aaKnown RBP9.44□□□□□ -0.9
CAPN3-216ENST00000567071 OTUD1Q5VV17 481 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-216ENST00000567071 MLIPQ5VWP3 458 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 DCUN1D2Q6PH85 259 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 OLFML1Q6UWY5 402 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 ISLR2Q6UXK2 745 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 ZNF662Q6ZS27 426 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 Q6ZVL8 140 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 SRLQ86TD4 932 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 RHOT2Q8IXI1 618 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 D2HGDHQ8N465 521 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 TAB3Q8N5C8 712 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-216ENST00000567071 EMC1Q8N766 993 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 JOSD2Q8TAC2 188 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 ZNF501Q96CX3 271 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-216ENST00000567071 ECHDC3Q96DC8 303 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 CXorf40BQ96DE9 158 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 MBD6Q96DN6 1003 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 TAAR6Q96RI8 345 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 LHPPQ9H008 270 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 RMI1Q9H9A7 625 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 PCMTD2Q9NV79 361 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 PARVAQ9NVD7 372 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 UVRAGQ9P2Y5 699 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 OR12D3Q9UGF7 316 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 NDOR1Q9UHB4 597 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 ANAPC7Q9UJX3 599 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 SCINQ9Y6U3 715 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 GTF3C1Q12789 2109 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 SONP18583 2426 aaKnown RBP9.43□□□□□ -0.9
CAPN3-216ENST00000567071 ANKRD12Q6UB98 2062 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 A0A1W2PQ67 120 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 GRID2IPA4D2P6 1211 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 SLC9B1P1A6NJY1 282 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 PDZK1P1A8MUH7 402 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 BTNL10A8MVZ5 291 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 PROM1O43490 865 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 KIF5CO60282 957 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 RASAL1O95294 804 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 ZBTB11O95625 1053 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-216ENST00000567071 MYBL2P10244 700 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 IGFBP2P18065 325 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 CSNK1DP48730 415 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 GSCP56915 257 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-216ENST00000567071 GNG11P61952 73 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 OGDHQ02218 1023 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 MESDQ14696 234 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 CYTH1Q15438 398 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 SLC25A52Q3SY17 297 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 ZNF569Q5MCW4 686 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 PPP1R15BQ5SWA1 713 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 LINC00696Q6ZRV3 163 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 NLRP14Q86W24 1093 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 FAM131BQ86XD5 332 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 CPNE8Q86YQ8 564 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-216ENST00000567071 EXD1Q8NHP7 514 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 GOT1L1Q8NHS2 421 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-216ENST00000567071 PHF10Q8WUB8 498 aaKnown RBP9.43□□□□□ -0.9
CAPN3-216ENST00000567071 PTERQ96BW5 349 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 AP2M1Q96CW1 435 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 TBC1D31Q96DN5 1066 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 VPS50Q96JG6 964 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 LMF1Q96S06 567 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 TBCBQ99426 244 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 MAP3K3Q99759 626 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 MRPL47Q9HD33 250 aaKnown RBP9.43□□□□□ -0.9
CAPN3-216ENST00000567071 HYOU1Q9Y4L1 999 aa9.43□□□□□ -0.9
CAPN3-216ENST00000567071 SIGLEC16A6NMB1 481 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 INAFM1C9JVW0 142 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 MAP3K7O43318 606 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 HTRA2O43464 458 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-216ENST00000567071 PRAMEF2O60811 474 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 DNAJC6O75061 913 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 PALMO75781 387 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 KLF7O75840 302 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-216ENST00000567071 MTA2O94776 668 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 SLCO2B1O94956 709 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 FTCDO95954 541 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 F12P00748 615 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-216ENST00000567071 KRT3P12035 628 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 TFE3P19532 575 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-216ENST00000567071 GPD1P21695 349 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 RFC1P35251 1148 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-216ENST00000567071 FLT3P36888 993 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 SLC19A1P41440 591 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 YBEYP58557 167 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-216ENST00000567071 NRG1Q02297 640 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-216ENST00000567071 MFAP5Q13361 173 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 GPR18Q14330 331 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 TCEAL1Q15170 157 aa9.42□□□□□ -0.9
CAPN3-216ENST00000567071 SEPT7Q16181 437 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms