RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 GDAP1Q8TB36 358 aa12.4□□□□□ -0.42
RNF40-208ENST00000565995 LINC00615Q96LM1 132 aaPredicted RBP12.4□□□□□ -0.42
RNF40-208ENST00000565995 PPM1MQ96MI6 270 aa12.4□□□□□ -0.42
RNF40-208ENST00000565995 OLFM3Q96PB7 478 aa12.4□□□□□ -0.42
RNF40-208ENST00000565995 PITPNM3Q9BZ71 974 aa12.4□□□□□ -0.42
RNF40-208ENST00000565995 ACTR5Q9H9F9 607 aaPredicted RBP12.4□□□□□ -0.42
RNF40-208ENST00000565995 BPIFA1Q9NP55 256 aa12.4□□□□□ -0.42
RNF40-208ENST00000565995 SMOXQ9NWM0 555 aa12.4□□□□□ -0.42
RNF40-208ENST00000565995 ENTPD4Q9Y227 616 aa12.4□□□□□ -0.42
RNF40-208ENST00000565995 NTNG1Q9Y2I2 539 aa12.4□□□□□ -0.42
RNF40-208ENST00000565995 LUC7L2Q9Y383 392 aaKnown RBP12.4□□□□□ -0.42
RNF40-208ENST00000565995 PCDHGA10Q9Y5H3 936 aa12.4□□□□□ -0.42
RNF40-208ENST00000565995 COPG1Q9Y678 874 aaKnown RBP12.4□□□□□ -0.42
RNF40-208ENST00000565995 SLC9B1P1A6NJY1 282 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 AKR1B15C9JRZ8 316 aaPredicted RBP12.39□□□□□ -0.43
RNF40-208ENST00000565995 H3BMH7 237 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 GAPDHSO14556 408 aaPredicted RBP12.39□□□□□ -0.43
RNF40-208ENST00000565995 HNRNPRO43390 633 aaKnown RBP12.39□□□□□ -0.43
RNF40-208ENST00000565995 IPO13O94829 963 aaKnown RBP12.39□□□□□ -0.43
RNF40-208ENST00000565995 LCA5LO95447 670 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 MT-CYBP00156 380 aaPredicted RBP12.39□□□□□ -0.43
RNF40-208ENST00000565995 CD63P08962 238 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 PYGMP11217 842 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 NDUFS1P28331 727 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 CA5AP35218 305 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 SPAM1P38567 509 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 XRCC4Q13426 336 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 ITGA9Q13797 1035 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 ELOAQ14241 798 aaKnown RBP12.39□□□□□ -0.43
RNF40-208ENST00000565995 PCSK7Q16549 785 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 TEX44Q53QW1 395 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 DCAF10Q5QP82 559 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 ZFYVE27Q5T4F4 411 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 LYPLAL1Q5VWZ2 237 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 ARMC6Q6NXE6 501 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 CPNE8Q86YQ8 564 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 SRRM1Q8IYB3 904 aaKnown RBP12.39□□□□□ -0.43
RNF40-208ENST00000565995 GALNT16Q8N428 558 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 OR2L2Q8NH16 312 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 SPATA22Q8NHS9 363 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 UBE2Q2Q8WVN8 375 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 FER1L6-AS2Q96M78 137 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 ZNF830Q96NB3 372 aaPredicted RBP12.39□□□□□ -0.43
RNF40-208ENST00000565995 AGAP3Q96P47 875 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 TLR10Q9BXR5 811 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 WWP1Q9H0M0 922 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 GLOD4Q9HC38 313 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 IMP3Q9NV31 184 aaKnown RBP12.39□□□□□ -0.43
RNF40-208ENST00000565995 SOHLH2Q9NX45 425 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 IMPACTQ9P2X3 320 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 LCMT1Q9UIC8 334 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 SERTAD3Q9UJW9 196 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 NENFQ9UMX5 172 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 PADI2Q9Y2J8 665 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 CFAP20Q9Y6A4 193 aaKnown RBP12.39□□□□□ -0.43
RNF40-208ENST00000565995 COLEC10Q9Y6Z7 277 aa12.39□□□□□ -0.43
RNF40-208ENST00000565995 NCOA6Q14686 2063 aaPredicted RBP12.38□□□□□ -0.43
RNF40-208ENST00000565995 A0A087X0T9 212 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 A0A1W2PQJ5 194 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 C3orf70A6NLC5 250 aaPredicted RBP12.38□□□□□ -0.43
RNF40-208ENST00000565995 OR2AG2A6NM03 316 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 TMEM150CB9EJG8 249 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 UGT1A9O60656 530 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 MFAP3LO75121 409 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 ALPPP05187 535 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 FAM228BP0C875 321 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 UGT1A6P19224 532 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 UGT1A1P22309 533 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 UGT1A4P22310 534 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 PRDX3P30048 256 aaKnown RBP12.38□□□□□ -0.43
RNF40-208ENST00000565995 SSR1P43307 286 aaKnown RBP12.38□□□□□ -0.43
RNF40-208ENST00000565995 AP1B1Q10567 949 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 PDK1Q15118 436 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 ZRSR2Q15696 482 aaKnown RBP12.38□□□□□ -0.43
RNF40-208ENST00000565995 GPRC6AQ5T6X5 926 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 FBXO38Q6PIJ6 1188 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 IGFL2Q6UWQ7 119 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 MRGPREQ86SM8 312 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 KCNMB4Q86W47 210 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 RAPGEF5Q92565 580 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 TEKT5Q96M29 485 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 C12orf66Q96MD2 445 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 C17orf62Q9BQA9 187 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 CEP41Q9BYV8 373 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 CHRNA10Q9GZZ6 450 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 UGT1A7Q9HAW7 530 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 UGT1A10Q9HAW8 530 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 UGT1A8Q9HAW9 530 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 HACD3Q9P035 362 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 CAPN11Q9UMQ6 739 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 HEBP2Q9Y5Z4 205 aa12.38□□□□□ -0.43
RNF40-208ENST00000565995 ZFHX3Q15911 3703 aa12.37□□□□□ -0.43
RNF40-208ENST00000565995 A0A0A6YYK5 440 aaPredicted RBP12.37□□□□□ -0.43
RNF40-208ENST00000565995 GLYATL1P3A0A0U1RQE8 302 aa12.37□□□□□ -0.43
RNF40-208ENST00000565995 AGAP14A8MT82 685 aa12.37□□□□□ -0.43
RNF40-208ENST00000565995 C9J4A7 227 aa12.37□□□□□ -0.43
RNF40-208ENST00000565995 E7EQ34 232 aa12.37□□□□□ -0.43
RNF40-208ENST00000565995 ZNF749O43361 778 aa12.37□□□□□ -0.43
RNF40-208ENST00000565995 SLC4A1P02730 911 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms