RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ULBP3Q9BZM4 244 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 CASS4Q9NQ75 786 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 BFARQ9NZS9 450 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 TUBD1Q9UJT1 453 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 RARRES3Q9UL19 164 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 JRKLQ9Y4A0 524 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 KCTD3Q9Y597 815 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 PCDHB3Q9Y5E6 796 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 PIKFYVEQ9Y2I7 2098 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 ATRXP46100 2492 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 LOC400499M0QZD8 3231 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 TCRBV7S2A1N4TA0A589 114 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 RECKO95980 971 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 FGGP02679 453 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 CCNYL3P0C7X3 344 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 MSL3P1P0C860 447 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 TTPAP49638 278 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 SYTL3Q4VX76 610 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 FASTKD1Q53R41 847 aaKnown RBP16.32■□□□□ 0.2
USB1-211ENST00000565662 PCID2Q5JVF3 399 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 TSTD2Q5T7W7 516 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 C1orf54Q8WWF1 131 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 ANP32BQ92688 251 aaKnown RBP16.32■□□□□ 0.2
USB1-211ENST00000565662 OR6C1Q96RD1 312 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 INSM2Q96T92 566 aaPredicted RBP16.32■□□□□ 0.2
USB1-211ENST00000565662 SPRY4Q9C004 299 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 TFB2MQ9H5Q4 396 aaKnown RBP16.32■□□□□ 0.2
USB1-211ENST00000565662 LATS2Q9NRM7 1088 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 C1GALT1Q9NS00 363 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 HRASLS2Q9NWW9 162 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 SMARCAL1Q9NZC9 954 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 PPP2R2CQ9Y2T4 447 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 TCAF1Q9Y4C2 921 aa16.32■□□□□ 0.2
USB1-211ENST00000565662 A0A0U1RQJ8 604 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 C21orf140B9A014 251 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 KPNA5O15131 536 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 ZSCAN12O43309 604 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 SGTAO43765 313 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 FOXN2P32314 431 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 STAT5AP42229 794 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 NPY2RP49146 381 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 SEPHS1P49903 392 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 ARSDP51689 593 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 TUBB3Q13509 450 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 DBN1Q16643 649 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 C6orf15Q6UXA7 325 aaPredicted RBP16.31■□□□□ 0.2
USB1-211ENST00000565662 FAM92BQ6ZTR7 304 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 HOOK3Q86VS8 718 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 LRRC6Q86X45 466 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 OR4L1Q8NH43 312 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 LCN9Q8WX39 176 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 PBKQ96KB5 322 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 RMDN2Q96LZ7 410 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 PANX3Q96QZ0 392 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 OR52A5Q9H2C5 316 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 SRMSQ9H3Y6 488 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 MRM3Q9HC36 420 aaKnown RBP16.31■□□□□ 0.2
USB1-211ENST00000565662 BTRCQ9Y297 605 aa16.31■□□□□ 0.2
USB1-211ENST00000565662 COL6A6A6NMZ7 2263 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 AGRPO00253 132 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 TPH1P17752 444 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 PAMP19021 973 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 TPSB2P20231 275 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 SHMT2P34897 504 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 LEPRP48357 1165 aaKnown RBP16.3■□□□□ 0.2
USB1-211ENST00000565662 TUBB4BP68371 445 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 BASP1P80723 227 aaKnown RBP16.3■□□□□ 0.2
USB1-211ENST00000565662 CCZ1BP86790 482 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 CCZ1P86791 482 aaPredicted RBP16.3■□□□□ 0.2
USB1-211ENST00000565662 TUBB2AQ13885 445 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 TMED2Q15363 201 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 TPSAB1Q15661 275 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 RNF187Q5TA31 235 aaPredicted RBP16.3■□□□□ 0.2
USB1-211ENST00000565662 BORAQ6PGQ7 559 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 VASH2Q86V25 355 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 TBC1D21Q8IYX1 336 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 D2HGDHQ8N465 521 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 TFGQ92734 400 aaPredicted RBP16.3■□□□□ 0.2
USB1-211ENST00000565662 TUBB2BQ9BVA1 445 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 VPS9D1Q9Y2B5 631 aa16.3■□□□□ 0.2
USB1-211ENST00000565662 GOLGA6L10A0A0M3HER8 536 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 C2orf74A8MZ97 194 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 CEP104O60308 925 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 CPNE3O75131 537 aaKnown RBP16.29■□□□□ 0.2
USB1-211ENST00000565662 POLBP06746 335 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 LIFP15018 202 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 SNX1Q13596 522 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 DNAJC21Q5F1R6 531 aaKnown RBP16.29■□□□□ 0.2
USB1-211ENST00000565662 KIAA1614Q5VZ46 1190 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 PHC3Q8NDX5 983 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 OR13J1Q8NGT2 312 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 OR6P1Q8NGX9 317 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 GSDMBQ8TAX9 411 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 GRK7Q8WTQ7 553 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 ASZ1Q8WWH4 475 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 ELMO1Q92556 727 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 FERD3LQ96RJ6 166 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 CTRCQ99895 268 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 SLC12A9Q9BXP2 914 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 TLR10Q9BXR5 811 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms