RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 USP10Q14694 798 aaKnown RBP18.41■□□□□ 0.54
RAB40C-207ENST00000563109 LGSNQ5TDP6 509 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 LRRC8EQ6NSJ5 796 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 PIM3Q86V86 326 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 SLC22A15Q8IZD6 547 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 CNPY4Q8N129 248 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 NAGSQ8N159 534 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 SFRP1Q8N474 314 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 GPR156Q8NFN8 814 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 OR6C4Q8NGE1 309 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 CD200R1Q8TD46 325 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 SLC37A2Q8TED4 501 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 RMDN2Q96LZ7 410 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 C12orf66Q96MD2 445 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 IMP3Q9NV31 184 aaKnown RBP18.41■□□□□ 0.54
RAB40C-207ENST00000563109 ARGLU1Q9NWB6 273 aaPredicted RBP18.41■□□□□ 0.54
RAB40C-207ENST00000563109 SLC24A2Q9UI40 661 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 ZNF180Q9UJW8 692 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 WDR37Q9Y2I8 494 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 MED16Q9Y2X0 877 aa18.41■□□□□ 0.54
RAB40C-207ENST00000563109 MTO1Q9Y2Z2 717 aaKnown RBP18.41■□□□□ 0.54
RAB40C-207ENST00000563109 ARHGEF17Q96PE2 2063 aaPredicted RBP18.41■□□□□ 0.54
RAB40C-207ENST00000563109 EP300Q09472 2414 aaPredicted RBP18.41■□□□□ 0.54
RAB40C-207ENST00000563109 TRBV23OR9-2A0A075B6M9 112 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 EIF3FO00303 357 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-207ENST00000563109 SLC30A4O14863 429 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 KRT38O76015 456 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 SLCO2B1O94956 709 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 CBSLP0DN79 551 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 MTHFD1P11586 935 aaKnown RBP18.4■□□□□ 0.54
RAB40C-207ENST00000563109 ENO3P13929 434 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-207ENST00000563109 BRAFP15056 766 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 PDHA2P29803 388 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 CBSP35520 551 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 MAZP56270 477 aaKnown RBP18.4■□□□□ 0.54
RAB40C-207ENST00000563109 IFFO1Q0D2I5 559 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 KRT33BQ14525 404 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 PROX2Q3B8N5 592 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 XKR5Q6UX68 686 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 PIP4P1Q86T03 277 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 CPNE9Q8IYJ1 553 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 GIMAP7Q8NHV1 300 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 PATE1Q8WXA2 126 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 FOPNLQ96NB1 174 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 CAMK1GQ96NX5 476 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 OLFM1Q99784 485 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 POPDC3Q9HBV1 291 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 POT1Q9NUX5 634 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 SCHIP1Q9P0W5 487 aaPredicted RBP18.4■□□□□ 0.54
RAB40C-207ENST00000563109 GALPQ9UBC7 116 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 PADI4Q9UM07 663 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 CDYLQ9Y232 598 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 FAM186AA6NE01 2351 aa18.4■□□□□ 0.54
RAB40C-207ENST00000563109 ASCC3Q8N3C0 2202 aaKnown RBP18.39■□□□□ 0.54
RAB40C-207ENST00000563109 OR52A4PA6NMU1 304 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 RHPN2P1A8MT19 583 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 VIPP01282 170 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 SHBGP04278 402 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 RPN2P04844 631 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 NUDT17P0C025 328 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 CKMT1AP12532 417 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 STMN1P16949 149 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 NDUFS1P28331 727 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 TAS2R39P59534 338 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 BMPR2Q13873 1038 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 CLCA4Q14CN2 919 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 RPE65Q16518 533 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 ACSBG2Q5FVE4 666 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 MROH9Q5TGP6 573 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 CAPRIN2Q6IMN6 1127 aaKnown RBP18.39■□□□□ 0.53
RAB40C-207ENST00000563109 ARL14Q8N4G2 192 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 SPDYE1Q8NFV5 336 aaPredicted RBP18.39■□□□□ 0.53
RAB40C-207ENST00000563109 DCAKDQ8WVC6 231 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 NAT6Q93015 286 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 SLC30A3Q99726 388 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 PSMC3IPQ9P2W1 217 aaPredicted RBP18.39■□□□□ 0.53
RAB40C-207ENST00000563109 CPNE7Q9UBL6 633 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 TSR3Q9UJK0 312 aaKnown RBP18.39■□□□□ 0.53
RAB40C-207ENST00000563109 COLEC10Q9Y6Z7 277 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 FRYLO94915 3013 aa18.39■□□□□ 0.53
RAB40C-207ENST00000563109 TNFSF14O43557 240 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 CBFA2T3O75081 653 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 KRT37O76014 449 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 CKMT2P17540 419 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 XRCC1P18887 633 aaPredicted RBP18.38■□□□□ 0.53
RAB40C-207ENST00000563109 CSRP1P21291 193 aaKnown RBP18.38■□□□□ 0.53
RAB40C-207ENST00000563109 MAPK9P45984 424 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 FASLGP48023 281 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 SERPINB8P50452 374 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 IL2P60568 153 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 RAB10P61026 200 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 HHEXQ03014 270 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 GBX1Q14549 363 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 PAQR3Q6TCH7 311 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 NEK10Q6ZWH5 1172 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 RAPH1Q70E73 1250 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 C17orf82Q86X59 251 aaPredicted RBP18.38■□□□□ 0.53
RAB40C-207ENST00000563109 VRK3Q8IV63 474 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 SFTPA2Q8IWL1 248 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 RBM12BQ8IXT5 1001 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms