RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ACSBG2Q5FVE4 666 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.57□□□□□ -0.88
CLK3-208ENST00000562626 RNF187Q5TA31 235 aaPredicted RBP9.57□□□□□ -0.88
CLK3-208ENST00000562626 WASH2PQ6VEQ5 465 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 CCNI2Q6ZMN8 369 aaPredicted RBP9.57□□□□□ -0.88
CLK3-208ENST00000562626 TMPRSS9Q7Z410 1059 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 ZNF438Q7Z4V0 828 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 STRA8Q7Z7C7 330 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 ZC3HC1Q86WB0 502 aaKnown RBP9.57□□□□□ -0.88
CLK3-208ENST00000562626 LMNTD2Q8IXW0 634 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 PPM1NQ8N819 430 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 LMNTD1Q8N9Z9 388 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 SIDT2Q8NBJ9 832 aaKnown RBP9.57□□□□□ -0.88
CLK3-208ENST00000562626 PHC3Q8NDX5 983 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 IFI44Q8TCB0 444 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 CD200R1Q8TD46 325 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 CALML6Q8TD86 181 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 MRRFQ96E11 262 aaKnown RBP9.57□□□□□ -0.88
CLK3-208ENST00000562626 CCDC3Q9BQI4 270 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 TBC1D10AQ9BXI6 508 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 FUT8Q9BYC5 575 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 WASH6PQ9NQA3 447 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 ZFATQ9P243 1243 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 CPNE7Q9UBL6 633 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 CIDEBQ9UHD4 219 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 GNPTGQ9UJJ9 305 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 IKZF3Q9UKT9 509 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 MTO1Q9Y2Z2 717 aaKnown RBP9.57□□□□□ -0.88
CLK3-208ENST00000562626 PCDHB1Q9Y5F3 818 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 NFS1Q9Y697 457 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 KNTC1P50748 2209 aa9.57□□□□□ -0.88
CLK3-208ENST00000562626 FASNP49327 2511 aaKnown RBP9.56□□□□□ -0.88
CLK3-208ENST00000562626 LIN7AO14910 233 aaPredicted RBP9.56□□□□□ -0.88
CLK3-208ENST00000562626 KCNJ13O60928 360 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 WISP3O95389 354 aaPredicted RBP9.56□□□□□ -0.88
CLK3-208ENST00000562626 FTH1P02794 183 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 GSTA2P09210 222 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 MTHFD1P11586 935 aaKnown RBP9.56□□□□□ -0.88
CLK3-208ENST00000562626 XRCC1P18887 633 aaPredicted RBP9.56□□□□□ -0.88
CLK3-208ENST00000562626 FDXRP22570 491 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 GCAP28676 217 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 CSF2RBP32927 897 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 FASLGP48023 281 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 CD151P48509 253 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 PDX1P52945 283 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 OR1D5P58170 312 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 CCL7P80098 99 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 HSPA14Q0VDF9 509 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 CCSMST1Q4G0I0 132 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 PPM1JQ5JR12 505 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 N4BP2L1Q5TBK1 243 aaPredicted RBP9.56□□□□□ -0.88
CLK3-208ENST00000562626 HECTD2Q5U5R9 776 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 NKAIN2Q5VXU1 208 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 TMEM207Q6UWW9 146 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 DHRS13Q6UX07 377 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 KIAA0408Q6ZU52 694 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 GALNT7Q86SF2 657 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 PDZD3Q86UT5 571 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 LRRC6Q86X45 466 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 CEP97Q8IW35 865 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 CTAGE3PQ8IX95 158 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 CPNE9Q8IYJ1 553 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 SLC22A15Q8IZD6 547 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 Q8N9G6 341 aaPredicted RBP9.56□□□□□ -0.88
CLK3-208ENST00000562626 MAPK15Q8TD08 544 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 AENQ8WTP8 325 aaKnown RBP9.56□□□□□ -0.88
CLK3-208ENST00000562626 SCG3Q8WXD2 468 aaKnown RBP9.56□□□□□ -0.88
CLK3-208ENST00000562626 VPS39Q96JC1 886 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 C12orf66Q96MD2 445 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 TTC1Q99614 292 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 CDC6Q99741 560 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 PARD6BQ9BYG5 372 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 SLC32A1Q9H598 525 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 ACSS3Q9H6R3 686 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 CAB39LQ9H9S4 337 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 LATS2Q9NRM7 1088 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 IMP3Q9NV31 184 aaKnown RBP9.56□□□□□ -0.88
CLK3-208ENST00000562626 OGFRQ9NZT2 677 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 LRIT1Q9P2V4 623 aa9.56□□□□□ -0.88
CLK3-208ENST00000562626 ATXN7L1Q9ULK2 861 aaPredicted RBP9.56□□□□□ -0.88
CLK3-208ENST00000562626 UNC79Q9P2D8 2635 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 FAM95CA0A1B0GW59 222 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 RIPK2O43353 540 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 NUDT21O43809 227 aaKnown RBP9.55□□□□□ -0.88
CLK3-208ENST00000562626 SLCO2B1O94956 709 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 SLC35G4P0C7Q5 338 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 GLB1P16278 677 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 VCLP18206 1134 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 CHRM3P20309 590 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 MCM3P25205 808 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 PPARGP37231 505 aaPredicted RBP9.55□□□□□ -0.88
CLK3-208ENST00000562626 PMS2P54278 862 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 TAS2R39P59534 338 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 PPP1CAP62136 330 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 INSM1Q01101 510 aaPredicted RBP9.55□□□□□ -0.88
CLK3-208ENST00000562626 HHEXQ03014 270 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 ABRQ12979 859 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 BMPR2Q13873 1038 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 GPR18Q14330 331 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 GRB7Q14451 532 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms