RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 TSPAN12O95859 305 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 PIM1P11309 404 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-211ENST00000559460 MTHFD1P11586 935 aaKnown RBP9.36□□□□□ -0.91
SMAD3-211ENST00000559460 UNGP13051 313 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-211ENST00000559460 MMP8P22894 467 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 PON1P27169 355 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 PCSK6P29122 969 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 ADAM8P78325 824 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 KRT85P78386 507 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 GALNT3Q14435 633 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 GSE1Q14687 1217 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 PDPK2PQ6A1A2 396 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 ISM2Q6H9L7 571 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 WDR59Q6PJI9 974 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 AMZ2Q86W34 360 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 PGBD5Q8N414 524 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 ATPAF2Q8N5M1 289 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMAD3-211ENST00000559460 ACBD4Q8NC06 268 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 PHF10Q8WUB8 498 aaKnown RBP9.36□□□□□ -0.91
SMAD3-211ENST00000559460 PPM1MQ96MI6 270 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 SMIM14Q96QK8 99 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 WDR24Q96S15 920 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 POLDIP3Q9BY77 421 aaKnown RBP9.36□□□□□ -0.91
SMAD3-211ENST00000559460 POLR1EQ9GZS1 481 aaKnown RBP9.36□□□□□ -0.91
SMAD3-211ENST00000559460 PTGFRNQ9P2B2 879 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 DHCR7Q9UBM7 475 aaKnown RBP9.36□□□□□ -0.91
SMAD3-211ENST00000559460 POMT2Q9UKY4 750 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 CHKBQ9Y259 395 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 TTLL3Q9Y4R7 772 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 CFAP20Q9Y6A4 193 aaKnown RBP9.36□□□□□ -0.91
SMAD3-211ENST00000559460 GTPBP10A4D1E9 387 aaKnown RBP9.35□□□□□ -0.91
SMAD3-211ENST00000559460 ZSCAN9O15535 394 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-211ENST00000559460 FZD6O60353 706 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 KLHL18O94889 574 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 SLCO2B1O94956 709 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 SLC4A1P02730 911 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 ST6GAL1P15907 406 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 NDUFS1P28331 727 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 NSFP46459 744 aaKnown RBP9.35□□□□□ -0.91
SMAD3-211ENST00000559460 ZNF143P52747 638 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-211ENST00000559460 CDH6P55285 790 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 FOXL2P58012 376 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 PPP6R3Q5H9R7 873 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-211ENST00000559460 MRPL14Q6P1L8 145 aaKnown RBP9.35□□□□□ -0.91
SMAD3-211ENST00000559460 NCCRP1Q6ZVX7 275 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-211ENST00000559460 CAMKMTQ7Z624 323 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 NOP9Q86U38 636 aaKnown RBP9.35□□□□□ -0.91
SMAD3-211ENST00000559460 KBTBD2Q8IY47 623 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 TRAM1L1Q8N609 369 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 NPWQ8N729 165 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 SLC20A1Q8WUM9 679 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 ASB5Q8WWX0 329 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 HAS2Q92819 552 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 C12orf66Q96MD2 445 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 NUP85Q9BW27 656 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 ZCCHC2Q9C0B9 1178 aaKnown RBP9.35□□□□□ -0.91
SMAD3-211ENST00000559460 DEF6Q9H4E7 631 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 ZNF395Q9H8N7 513 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-211ENST00000559460 FANCLQ9NW38 375 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 PLA2G3Q9NZ20 509 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 PLEKHA6Q9Y2H5 1048 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 COLEC10Q9Y6Z7 277 aa9.35□□□□□ -0.91
SMAD3-211ENST00000559460 PRRC2AP48634 2157 aaKnown RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 FAM90A27PA6NNH2 459 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 E9PLN8 166 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 SOCS6O14544 535 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 PRRG2O14669 202 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 MAP2K7O14733 419 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 F10P00742 488 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 CALB1P05937 261 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 SLC35G4P0C7Q5 338 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 ALAS2P22557 587 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 FDXRP22570 491 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 PBLDP30039 288 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 RPL26P61254 145 aaKnown RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 CACNG1Q06432 222 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 VWA3BQ502W6 1294 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 KRTCAP3Q53RY4 240 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 DNAJC24Q6P3W2 148 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 TLDC1Q6P9B6 456 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 DCUN1D2Q6PH85 259 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 Q6ZPB1 254 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 ZNF677Q86XU0 584 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 ZNF547Q8IVP9 402 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 DMRTC2Q8IXT2 367 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 CLYBLQ8N0X4 340 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 BEND7Q8N7W2 519 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 OR4E2Q8NGC2 313 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 GOT1L1Q8NHS2 421 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 SLC30A5Q8TAD4 765 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 DENND1AQ8TEH3 1009 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 AGAP11Q8TF27 550 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 THAP3Q8WTV1 239 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-211ENST00000559460 DLG3Q92796 817 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 FKBP10Q96AY3 582 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 ZNF653Q96CK0 615 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 ARSGQ96EG1 525 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 MCEEQ96PE7 176 aa9.34□□□□□ -0.91
SMAD3-211ENST00000559460 VKORC1Q9BQB6 163 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms