RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 FAM83HQ6ZRV2 1179 aaPredicted RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 FAM92BQ6ZTR7 304 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 SYDE1Q6ZW31 735 aaPredicted RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 OTOAQ7RTW8 1153 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 TMPRSS9Q7Z410 1059 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 ARHGAP22Q7Z5H3 698 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 HOOK3Q86VS8 718 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 BPHLQ86WA6 291 aaPredicted RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 LRRC6Q86X45 466 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 KMT5CQ86Y97 462 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 SPACA3Q8IXA5 215 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 PPIL6Q8IXY8 311 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 PIANPQ8IYJ0 282 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 TBC1D21Q8IYX1 336 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 CARFQ8N187 725 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 RAB42Q8N4Z0 105 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 IL22RA1Q8N6P7 574 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 MCUQ8NE86 351 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 ACVR1CQ8NER5 493 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 OR4E2Q8NGC2 313 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 CALML6Q8TD86 181 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 SKA2Q8WVK7 121 aaPredicted RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 ASZ1Q8WWH4 475 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 LCN9Q8WX39 176 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 ELMO1Q92556 727 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 UBXN4Q92575 508 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 TFGQ92734 400 aaPredicted RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 SLCO2A1Q92959 643 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 ART4Q93070 314 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 KIAA1143Q96AT1 154 aaPredicted RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 MFSD3Q96ES6 412 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 CAPZA3Q96KX2 299 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 C9orf72Q96LT7 481 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 ZNF778Q96MU6 729 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 FCRL3Q96P31 734 aaPredicted RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 TGM7Q96PF1 710 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 FERD3LQ96RJ6 166 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 CCNL2Q96S94 520 aaPredicted RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 TCF12Q99081 682 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 CD180Q99467 661 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 KIFC1Q9BW19 673 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 DDA1Q9BW61 102 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 TBC1D10AQ9BXI6 508 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 ULBP3Q9BZM4 244 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 CCDC68Q9H2F9 335 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 TRIT1Q9H3H1 467 aaKnown RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 SRMSQ9H3Y6 488 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 ZNF768Q9H5H4 540 aaKnown RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 MVB12BQ9H7P6 319 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 COG4Q9H9E3 785 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 FANCEQ9HB96 536 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 MRM3Q9HC36 420 aaKnown RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 PDE7BQ9NP56 450 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 FBXO8Q9NRD0 319 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 TREX1Q9NSU2 369 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 HRASLS2Q9NWW9 162 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 TMEM9Q9P0T7 183 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 PDP2Q9P2J9 529 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 EPHA6Q9UF33 1036 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 SLC2A6Q9UGQ3 507 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 ASIC3Q9UHC3 531 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 PCYOX1Q9UHG3 505 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 POLG2Q9UHN1 485 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 GNPTGQ9UJJ9 305 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 SOX13Q9UN79 622 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 LHX6Q9UPM6 363 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 ASF1AQ9Y294 204 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 PCDHGA3Q9Y5H0 932 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 CFAP20Q9Y6A4 193 aaKnown RBP4.27□□□□□ -1.73
SNX1-205ENST00000559339 MAD1L1Q9Y6D9 718 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 LRRK1Q38SD2 2015 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 RP1P56715 2156 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 LAMA5O15230 3695 aa4.27□□□□□ -1.73
SNX1-205ENST00000559339 USP24Q9UPU5 2620 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 CFAP47Q6ZTR5 3102 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 UNC13CQ8NB66 2214 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 TP53BP1Q12888 1972 aaPredicted RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 AKAP13Q12802 2813 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 FAM237BA0A1B0GVD1 139 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 A0A1W2PNU3 283 aaPredicted RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 GSAPA4D1B5 854 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 PMS2P1A4D2B8 440 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 OR5K3A6NET4 321 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 TLCD2A6NGC4 264 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 USP27XA6NNY8 438 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 C2orf74A8MZ97 194 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 C9orf172C9J069 976 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 E5RI56 91 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 GOLGA8MH3BSY2 632 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 SGTAO43765 313 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 OR1I1O60431 355 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 AVILO75366 819 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 ZBTB11O95625 1053 aaPredicted RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 TTC4O95801 387 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 ESR1P03372 595 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 MT-ND3P03897 115 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 CCNYL3P0C7X3 344 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 PRSS56P0CW18 603 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 CCL4P13236 92 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms