RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 WNT1P04628 370 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 SLC35G4P0C7Q5 338 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 TPBGLP0DKB5 382 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 CD1DP15813 335 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 ITGB6P18564 788 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 AP1S2P56377 157 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 NXPH1P58417 271 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 TCEA2Q15560 299 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 PEAR1Q5VY43 1037 aaPredicted RBP12.16□□□□□ -0.46
TPM1-209ENST00000558072 LVRNQ6Q4G3 990 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 FRA10AC1Q70Z53 315 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 CHST15Q7LFX5 561 aaPredicted RBP12.16□□□□□ -0.46
TPM1-209ENST00000558072 RAB44Q7Z6P3 723 aaPredicted RBP12.16□□□□□ -0.46
TPM1-209ENST00000558072 GKN2Q86XP6 184 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 HID1Q8IV36 788 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 SLC22A9Q8IVM8 553 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 ZNF547Q8IVP9 402 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 CPNE9Q8IYJ1 553 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 TCAIMQ8N3R3 496 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 C1orf216Q8TAB5 229 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 TCP10LQ8TDR4 215 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 EEF1AKMT1Q8WVE0 214 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 ATL1Q8WXF7 558 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 RDH14Q9HBH5 336 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 FGF22Q9HCT0 170 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 TMEM74BQ9NUR3 256 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 OGFRQ9NZT2 677 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 PILRBQ9UKJ0 227 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 PIKFYVEQ9Y2I7 2098 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 NEMP2A6NFY4 417 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 ZNF839A8K0R7 811 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 PATE3B3GLJ2 98 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 BTN3A1O00481 513 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 KERAO60938 352 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 SPAG7O75391 227 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 SYPP08247 313 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 ACP5P13686 325 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 NME1P15531 152 aaKnown RBP12.15□□□□□ -0.46
TPM1-209ENST00000558072 TFEBP19484 476 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 OAS2P29728 719 aaKnown RBP12.15□□□□□ -0.46
TPM1-209ENST00000558072 PBLDP30039 288 aaPredicted RBP12.15□□□□□ -0.46
TPM1-209ENST00000558072 HSD17B2P37059 387 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 CDKL1Q00532 357 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 TIAL1Q01085 375 aaKnown RBP eCLIP12.15□□□□□ -0.469e-7■■■□□ 18.9
TPM1-209ENST00000558072 FZD2Q14332 565 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 ALG11Q2TAA5 492 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 ACSBG2Q5FVE4 666 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 PPM1JQ5JR12 505 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 N4BP2L1Q5TBK1 243 aaPredicted RBP12.15□□□□□ -0.46
TPM1-209ENST00000558072 METTL2BQ6P1Q9 378 aaKnown RBP12.15□□□□□ -0.46
TPM1-209ENST00000558072 RD3Q7Z3Z2 195 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 C11orf96Q7Z7L8 435 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 PIM3Q86V86 326 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 PHACTR4Q8IZ21 702 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 KIRREL3Q8IZU9 778 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 CENPLQ8N0S6 344 aaPredicted RBP12.15□□□□□ -0.46
TPM1-209ENST00000558072 FBXO15Q8NCQ5 510 aaPredicted RBP12.15□□□□□ -0.46
TPM1-209ENST00000558072 ACVR1CQ8NER5 493 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 RAB3IL1Q8TBN0 382 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 KCTD4Q8WVF5 259 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 ZFPM2Q8WW38 1151 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 DYDC1Q8WWB3 177 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 OR1E3Q8WZA6 343 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 NXNL1Q96CM4 212 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 PHOX2BQ99453 314 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 IGSF5Q9NSI5 407 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 KLC4Q9NSK0 619 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 INTS9Q9NV88 658 aaKnown RBP12.15□□□□□ -0.46
TPM1-209ENST00000558072 FAM53CQ9NYF3 392 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 POLG2Q9UHN1 485 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 PCOLCE2Q9UKZ9 415 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 RNF112Q9ULX5 631 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 TNPO3Q9Y5L0 923 aaKnown RBP12.15□□□□□ -0.46
TPM1-209ENST00000558072 COLEC10Q9Y6Z7 277 aa12.15□□□□□ -0.46
TPM1-209ENST00000558072 ADAMTS9Q9P2N4 1935 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 PLIN3O60664 434 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 SNX2O60749 519 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 MYL2P10916 166 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 NEFHP12036 1026 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 CPA3P15088 417 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 JUNDP17535 347 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 RPA3P35244 121 aaPredicted RBP12.14□□□□□ -0.47
TPM1-209ENST00000558072 HNMTP50135 292 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 ZNF460Q14592 562 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 UAP1L1Q3KQV9 507 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 TMEM207Q6UWW9 146 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 ISCA2Q86U28 154 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 PDZD3Q86UT5 571 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 GPSM1Q86YR5 675 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 RBM12BQ8IXT5 1001 aaKnown RBP12.14□□□□□ -0.47
TPM1-209ENST00000558072 SLC22A18ASQ8N1D0 253 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 GIMAP7Q8NHV1 300 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 LKAAEAR1Q8TD35 194 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 GPBAR1Q8TDU6 330 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 ASB11Q8WXH4 323 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 PIGKQ92643 395 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 TSACCQ96A04 125 aaPredicted RBP12.14□□□□□ -0.47
TPM1-209ENST00000558072 PDXPQ96GD0 296 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 SLC12A9Q9BXP2 914 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 NUSAP1Q9BXS6 441 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms