RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 FNBP1LQ5T0N5 605 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 FAM182AQ5T1J6 154 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 ZFYVE27Q5T4F4 411 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 FAM151BQ6UXP7 276 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 DET1Q7L5Y6 550 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 ZNF571Q7Z3V5 609 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-219ENST00000556432 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-219ENST00000556432 FAR1Q8WVX9 515 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 SRMSQ9H3Y6 488 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 DEF6Q9H4E7 631 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 IFT80Q9P2H3 777 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-219ENST00000556432 LIMA1Q9UHB6 759 aaKnown RBP13.52□□□□□ -0.25
ACTN1-219ENST00000556432 IP6K2Q9UHH9 426 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 ANAPC7Q9UJX3 599 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 COLEC10Q9Y6Z7 277 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 PKDREJQ9NTG1 2253 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 LRRC53A6NM62 1247 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 MATN2O00339 956 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 AURKAO14965 403 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 GPR39O43194 453 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 UGT1A9O60656 530 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 MT-CYBP00156 380 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-219ENST00000556432 STSP08842 583 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 ST6GAL1P15907 406 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 UGT1A6P19224 532 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 UGT1A1P22309 533 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 UGT1A4P22310 534 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 NDUFS1P28331 727 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 PTGER4P35408 488 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 ZBTB17Q13105 803 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 AIMP2Q13155 320 aaKnown RBP13.51□□□□□ -0.25
ACTN1-219ENST00000556432 ART3Q13508 389 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 ZNF169Q14929 603 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-219ENST00000556432 METRNLQ641Q3 311 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 NT5DC3Q86UY8 548 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 HOOK3Q86VS8 718 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 BEND7Q8N7W2 519 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-219ENST00000556432 OR2Y1Q8NGV0 311 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 PPP4R1Q8TF05 950 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 CPLX3Q8WVH0 158 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 ZFPM2Q8WW38 1151 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 LCN9Q8WX39 176 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 HDAC11Q96DB2 347 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 AGAP3Q96P47 875 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 XPO4Q9C0E2 1151 aaKnown RBP13.51□□□□□ -0.25
ACTN1-219ENST00000556432 UGT1A7Q9HAW7 530 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 UGT1A10Q9HAW8 530 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 UGT1A8Q9HAW9 530 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 IRAK4Q9NWZ3 460 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 MYO6Q9UM54 1294 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 SPO11Q9Y5K1 396 aa13.51□□□□□ -0.25
ACTN1-219ENST00000556432 A0A1W2PQJ5 194 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 DDX3XO00571 662 aaKnown RBP eCLIP13.5□□□□□ -0.25
ACTN1-219ENST00000556432 POLBP06746 335 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 CBSLP0DN79 551 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 PVRP15151 417 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 MSH3P20585 1137 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 CBSP35520 551 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 SPAM1P38567 509 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 TSFMP43897 325 aaKnown RBP13.5□□□□□ -0.25
ACTN1-219ENST00000556432 FOXL2P58012 376 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 KLHL30Q0D2K2 578 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 AP1B1Q10567 949 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 LONRF2Q1L5Z9 754 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 AGAP7PQ5VUJ5 663 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 PPP1R32Q7Z5V6 425 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 CNTD1Q8N815 330 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 NIPA2Q8N8Q9 360 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 COG1Q8WTW3 980 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 PTERQ96BW5 349 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 IMP4Q96G21 291 aaKnown RBP13.5□□□□□ -0.25
ACTN1-219ENST00000556432 MAGEB10Q96LZ2 347 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-219ENST00000556432 AGAP4Q96P64 663 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 SRPK1Q96SB4 655 aaKnown RBP13.5□□□□□ -0.25
ACTN1-219ENST00000556432 ZNF670Q9BS34 389 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 IL26Q9NPH9 171 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 OLAHQ9NV23 265 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 SUCOQ9UBS9 1254 aaKnown RBP13.5□□□□□ -0.25
ACTN1-219ENST00000556432 FBXL4Q9UKA2 621 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 ACSL5Q9ULC5 683 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 CDYLQ9Y232 598 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 KLF2Q9Y5W3 355 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-219ENST00000556432 HEBP2Q9Y5Z4 205 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 DNMT3AQ9Y6K1 912 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-219ENST00000556432 TACC2O95359 2948 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 ZFHX3Q15911 3703 aa13.5□□□□□ -0.25
ACTN1-219ENST00000556432 CCDC66A2RUB6 948 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 ALOX12BO75342 701 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 PMPCBO75439 489 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 JRKO75564 520 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 OR2B3O76000 313 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 NDST3O95803 873 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 CD63P08962 238 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 HTR1EP28566 365 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 PRDX3P30048 256 aaKnown RBP13.49□□□□□ -0.25
ACTN1-219ENST00000556432 TNNT3P45378 269 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-219ENST00000556432 KCNK10P57789 538 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 IFI35P80217 286 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-219ENST00000556432 DCDP81605 110 aaKnown RBP13.49□□□□□ -0.25
ACTN1-219ENST00000556432 SLC10A2Q12908 348 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms