RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 RPS18P62269 152 aaKnown RBP3.07□□□□□ -1.92
SNX6-204ENST00000555541 PRKAA1Q13131 559 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 P2RY6Q15077 328 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 UGP2Q16851 508 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 ZSCAN23Q3MJ62 389 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 GKAP1Q5VSY0 366 aaPredicted RBP3.07□□□□□ -1.92
SNX6-204ENST00000555541 ARHGEF16Q5VV41 709 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 SARM1Q6SZW1 724 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 SLC16A9Q7RTY1 509 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 CDC20BQ86Y33 519 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 SMC5Q8IY18 1101 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 NGEFQ8N5V2 710 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 LINC00612Q8N6U2 182 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 NAXEQ8NCW5 288 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 C7orf26Q96N11 449 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 ZNF582Q96NG8 517 aaPredicted RBP3.07□□□□□ -1.92
SNX6-204ENST00000555541 DACH2Q96NX9 599 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 GAD1Q99259 594 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 HGH1Q9BTY7 390 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 LAT2Q9GZY6 243 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 MUC13Q9H3R2 512 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 PLK3Q9H4B4 646 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 SMC4Q9NTJ3 1288 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 KLK13Q9UKR3 277 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 IGHV4-4A0A075B6R2 117 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 IGLV9-49A0A0B4J1Y8 123 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 PRR32B1ATL7 298 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 DNM1LO00429 736 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 ZNF646O15015 1829 aaPredicted RBP3.06□□□□□ -1.92
SNX6-204ENST00000555541 DDX58O95786 925 aaKnown RBP3.06□□□□□ -1.92
SNX6-204ENST00000555541 GH2P01242 217 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 RAF1P04049 648 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 SRPRAP08240 638 aaKnown RBP3.06□□□□□ -1.92
SNX6-204ENST00000555541 ACP2P11117 423 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 PSMC4P43686 418 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 PRRC2AP48634 2157 aaKnown RBP3.06□□□□□ -1.92
SNX6-204ENST00000555541 CDH11P55287 796 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 SNRPD1P62314 119 aaKnown RBP3.06□□□□□ -1.92
SNX6-204ENST00000555541 RIGQ13278 110 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 G3BP1Q13283 466 aaKnown RBP eCLIP3.06□□□□□ -1.92
SNX6-204ENST00000555541 ADALQ6DHV7 355 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 DOK6Q6PKX4 331 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 PXKQ7Z7A4 578 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 TMTC2Q8N394 836 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 PDILTQ8N807 584 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 ZNF383Q8NA42 475 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 TDRD7Q8NHU6 1098 aaKnown RBP3.06□□□□□ -1.92
SNX6-204ENST00000555541 POMGNT1Q8WZA1 660 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 DAZLQ92904 295 aaKnown RBP3.06□□□□□ -1.92
SNX6-204ENST00000555541 PPM1MQ96MI6 270 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 DDOQ99489 341 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 NCAPGQ9BPX3 1015 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 TRIM51Q9BSJ1 452 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 FGFBP2Q9BYJ0 223 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 NENFQ9UMX5 172 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 MYH15Q9Y2K3 1946 aa3.06□□□□□ -1.92
SNX6-204ENST00000555541 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.06□□□□□ -1.92
SNX6-204ENST00000555541 ZNF197O14709 1029 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 NDUFS4O43181 175 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 HS6ST1O60243 411 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 SLC6A12P48065 614 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 CAMPP49913 170 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 LGALS3BPQ08380 585 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 GPR17Q13304 367 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 GLIPR1L2Q4G1C9 344 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 GCNT6Q5T4J0 391 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 CLEC17AQ6ZS10 378 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 Q6ZSR9 355 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 DNAJC22Q8N4W6 341 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 OLIG1Q8TAK6 271 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 HSD17B8Q92506 261 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 MOAP1Q96BY2 351 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 MYADMQ96S97 322 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 SLC26A6Q9BXS9 759 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 DIAPH3Q9NSV4 1193 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 PAG1Q9NWQ8 432 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 FLRT3Q9NZU0 649 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 CMAHPQ9Y471 501 aa3.05□□□□□ -1.92
SNX6-204ENST00000555541 MED19A0JLT2 244 aaPredicted RBP3.04□□□□□ -1.92
SNX6-204ENST00000555541 ATP6V0E1O15342 81 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 RNASEH2AO75792 299 aaKnown RBP3.04□□□□□ -1.92
SNX6-204ENST00000555541 TBX18O95935 607 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 LAMP2P13473 410 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 RARGP13631 454 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 PRG2P13727 222 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 NMBRP28336 390 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 NKX2-1P43699 371 aaPredicted RBP3.04□□□□□ -1.92
SNX6-204ENST00000555541 PRAMEP78395 509 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 PPP2R2BQ00005 443 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 SP3Q02447 781 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 IKQ13123 557 aaPredicted RBP3.04□□□□□ -1.92
SNX6-204ENST00000555541 TEAD2Q15562 447 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 KIAA0930Q6ICG6 404 aaPredicted RBP3.04□□□□□ -1.92
SNX6-204ENST00000555541 KLHL35Q6PF15 583 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 CORO6Q6QEF8 472 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 ZNF554Q86TJ5 538 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 TICAM1Q8IUC6 712 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 ARID3BQ8IVW6 561 aaPredicted RBP3.04□□□□□ -1.92
SNX6-204ENST00000555541 LMNTD2Q8IXW0 634 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 CPSF7Q8N684 471 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms