RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 BLOC1S1P78537 153 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 MRPS35P82673 323 aaKnown RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 GNA12Q03113 381 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CNTN1Q12860 1018 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 SLC14A1Q13336 389 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 MAMLD1Q13495 774 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 SHBQ15464 509 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 ARL13BQ3SXY8 428 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 POM121L1PQ3SYA9 428 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CD300EQ496F6 205 aaPredicted RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 FILIP1LQ4L180 1135 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 SFMBT2Q5VUG0 894 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 FAM46CQ5VWP2 391 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 PLEKHA7Q6IQ23 1121 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 RWDD4Q6NW29 188 aaKnown RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 IL27RAQ6UWB1 636 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 LRRC31Q6UY01 552 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 DPY19L3Q6ZPD9 716 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CYP4V2Q6ZWL3 525 aaPredicted RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 DSG4Q86SJ6 1040 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 LUZP1Q86V48 1076 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 TRIM69Q86WT6 500 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 NAXDQ8IW45 347 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 PYROXD2Q8N2H3 581 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 ARFGAP1Q8N6T3 406 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 RTL3Q8N8U3 475 aaKnown RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 ATP11CQ8NB49 1132 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 SIMC1Q8NDZ2 872 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 TMIEQ8NEW7 156 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 NLGN4YQ8NFZ3 816 aaPredicted RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 ACTRT2Q8TDY3 377 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 VCPIP1Q96JH7 1222 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 KLHL32Q96NJ5 620 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 BBC3Q96PG8 261 aaPredicted RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 PEBP4Q96S96 227 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CNPY3Q9BT09 278 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 EDEM3Q9BZQ6 932 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 TRIM7Q9C029 511 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 PRDM13Q9H4Q3 707 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 SLC32A1Q9H598 525 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 HAUS4Q9H6D7 363 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 RETREG1Q9H6L5 497 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 GAREM1Q9H706 876 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 TM7SF3Q9NS93 570 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 GPATCH2LQ9NWQ4 482 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 AIPL1Q9NZN9 384 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 OR12D3Q9UGF7 316 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 TLK1Q9UKI8 766 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 ANGPTL2Q9UKU9 493 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 FZD10Q9ULW2 581 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 NENFQ9UMX5 172 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 BTBD3Q9Y2F9 522 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 ANKRD6Q9Y2G4 727 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 PCDHB1Q9Y5F3 818 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 PCDHGB2Q9Y5G2 931 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 PLXNB3Q9ULL4 1909 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CEP295Q9C0D2 2601 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 USP24Q9UPU5 2620 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 PCSK5Q92824 1860 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 ASPMQ8IZT6 3477 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 LRRK1Q38SD2 2015 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 COL5A1P20908 1838 aaPredicted RBP4.19□□□□□ -1.74
VTI1B-203ENST00000554636 A0A1B0GTQ1 180 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 TMCO5BA8MYB1 307 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 TOR1BO14657 336 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 RTN2O75298 545 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 TMCC1O94876 653 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 GSRP00390 522 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 SERPINC1P01008 464 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 GYPCP04921 128 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 GZMAP12544 262 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 SKILP12757 684 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 PSMA2P25787 234 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 EPHB2P29323 1055 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 GKP32189 559 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 CCT8P50990 548 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 CCNHP51946 323 aaPredicted RBP4.19□□□□□ -1.74
VTI1B-203ENST00000554636 AIF1P55008 147 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 NXPH1P58417 271 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 SIM1P81133 766 aaPredicted RBP4.19□□□□□ -1.74
VTI1B-203ENST00000554636 IL9RQ01113 521 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 MC2RQ01718 297 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 TLE1Q04724 770 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 SLC20A2Q08357 652 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 KLHL30Q0D2K2 578 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 HNRNPDQ14103 355 aaKnown RBP4.19□□□□□ -1.74
VTI1B-203ENST00000554636 FGL2Q14314 439 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 CA9Q16790 459 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF284Q2VY69 593 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 HLA-BQ31612 363 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 ZSCAN23Q3MJ62 389 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 ACCSLQ4AC99 568 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 KHDC1Q4VXA5 237 aaKnown RBP4.19□□□□□ -1.74
VTI1B-203ENST00000554636 CARD16Q5EG05 197 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 NAPEPLDQ6IQ20 393 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 RETSATQ6NUM9 610 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 PPP1R2P3Q6NXS1 205 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 FBXO42Q6P3S6 717 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 DCUN1D2Q6PH85 259 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 ERN2Q76MJ5 926 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms