RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 METRNLQ641Q3 311 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 LVRNQ6Q4G3 990 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 WASH2PQ6VEQ5 465 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 GKN2Q86XP6 184 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 CFAP206Q8IYR0 622 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 PHC3Q8NDX5 983 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 FAM76AQ8TAV0 307 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 STAG3L4Q8TBR4 150 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 EEF1AKMT1Q8WVE0 214 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 TSACCQ96A04 125 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-210ENST00000553950 KIAA1191Q96A73 305 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 SCYL1Q96KG9 808 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 SLC30A3Q99726 388 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 MRPL57Q9BQC6 102 aaKnown RBP14.21□□□□□ -0.13
SHMT2-210ENST00000553950 TRIM54Q9BYV2 358 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 WASH6PQ9NQA3 447 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 KLC4Q9NSK0 619 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 FAM8A1Q9UBU6 413 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 PCDH15Q96QU1 1955 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 ANKRD12Q6UB98 2062 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 PDZK1P1A8MUH7 402 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 CER1O95813 267 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 TSPAN12O95859 305 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 S100BP04271 92 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-210ENST00000553950 TFEBP19484 476 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 MAP4P27816 1152 aaKnown RBP14.2□□□□□ -0.14
SHMT2-210ENST00000553950 NDUFS1P28331 727 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 ACTR1BP42025 376 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 CTSKP43235 329 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 CSNK1EP49674 416 aaKnown RBP14.2□□□□□ -0.14
SHMT2-210ENST00000553950 AP1S2P56377 157 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 ACTR1AP61163 376 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 ASPHQ12797 758 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 NFE2L1Q14494 772 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 TECRLQ5HYJ1 363 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 PPM1JQ5JR12 505 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 N4BP2L1Q5TBK1 243 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-210ENST00000553950 TTC23LQ6PF05 361 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 RD3Q7Z3Z2 195 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 CCDC63Q8NA47 563 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 GPBAR1Q8TDU6 330 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 NXNL1Q96CM4 212 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 CCDC126Q96EE4 140 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 LRFN3Q9BTN0 628 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 IGSF5Q9NSI5 407 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 XPR1Q9UBH6 696 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 PCOLCE2Q9UKZ9 415 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 RUVBL2Q9Y230 463 aaKnown RBP14.2□□□□□ -0.14
SHMT2-210ENST00000553950 CDYLQ9Y232 598 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 DNAJC16Q9Y2G8 782 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 PLLPQ9Y342 182 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 PRKAB1Q9Y478 270 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 SLCO1B1Q9Y6L6 691 aa14.2□□□□□ -0.14
SHMT2-210ENST00000553950 A0A1B0GVT2 93 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 PRR19A6NJB7 356 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 OR5K4A6NMS3 321 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 H3BQF6 201 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 ZBTB14O43829 449 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 SMIM24O75264 130 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 SPAG7O75391 227 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 CFIP05156 583 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 HIST1H2AGP0C0S8 130 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-210ENST00000553950 HIST1H2ADP20671 130 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 OAS2P29728 719 aaKnown RBP14.19□□□□□ -0.14
SHMT2-210ENST00000553950 MPLP40238 635 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 PREPP48147 710 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 CTBSQ01459 385 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 UAP1L1Q3KQV9 507 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 CDKL4Q5MAI5 379 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 SLC23A3Q6PIS1 610 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 TMEM207Q6UWW9 146 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 PIWIL4Q7Z3Z4 852 aaKnown RBP14.19□□□□□ -0.14
SHMT2-210ENST00000553950 SPATS2Q86XZ4 545 aaKnown RBP14.19□□□□□ -0.14
SHMT2-210ENST00000553950 RAB42Q8N4Z0 105 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 FBXO15Q8NCQ5 510 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-210ENST00000553950 TCP10LQ8TDR4 215 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 NAT14Q8WUY8 206 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 ANKRD49Q8WVL7 239 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 HIST1H2AHQ96KK5 128 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 ELF4Q99607 663 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-210ENST00000553950 HIST1H2AJQ99878 128 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 H2AFJQ9BTM1 129 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 LRRC61Q9BV99 259 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 NUSAP1Q9BXS6 441 aaKnown RBP14.19□□□□□ -0.14
SHMT2-210ENST00000553950 OR52A5Q9H2C5 316 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 STN1Q9H668 368 aaKnown RBP14.19□□□□□ -0.14
SHMT2-210ENST00000553950 RDH14Q9HBH5 336 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 NUDT4Q9NZJ9 180 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 GALPQ9UBC7 116 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 GULP1Q9UBP9 304 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 GMEB2Q9UKD1 530 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 RNF112Q9ULX5 631 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 SLC6A14Q9UN76 642 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 DOLKQ9UPQ8 538 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 KCNK6Q9Y257 313 aa14.19□□□□□ -0.14
SHMT2-210ENST00000553950 ARHGEF17Q96PE2 2063 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-210ENST00000553950 KIR2DS5A0A0G2JLQ3 304 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 A0A0G2JNG1 304 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 NPEPPSL1A6NEC2 478 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 KIR2DS3K7RE56 304 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms