RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 CATSPER1Q8NEC5 780 aa9.31□□□□□ -0.92
CHD8-205ENST00000553651 SPDYE1Q8NFV5 336 aaPredicted RBP9.31□□□□□ -0.92
CHD8-205ENST00000553651 LRRN4Q8WUT4 740 aa9.31□□□□□ -0.92
CHD8-205ENST00000553651 ZFPM2Q8WW38 1151 aa9.31□□□□□ -0.92
CHD8-205ENST00000553651 NR4A3Q92570 626 aa9.31□□□□□ -0.92
CHD8-205ENST00000553651 PTERQ96BW5 349 aa9.31□□□□□ -0.92
CHD8-205ENST00000553651 ZNF653Q96CK0 615 aa9.31□□□□□ -0.92
CHD8-205ENST00000553651 TSGA13Q96PP4 275 aa9.31□□□□□ -0.92
CHD8-205ENST00000553651 FANCEQ9HB96 536 aa9.31□□□□□ -0.92
CHD8-205ENST00000553651 MAGEE1Q9HCI5 957 aa9.31□□□□□ -0.92
CHD8-205ENST00000553651 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.31□□□□□ -0.92
CHD8-205ENST00000553651 IMP3Q9NV31 184 aaKnown RBP9.31□□□□□ -0.92
CHD8-205ENST00000553651 SEPT11Q9NVA2 429 aaKnown RBP9.31□□□□□ -0.92
CHD8-205ENST00000553651 FBXL4Q9UKA2 621 aa9.31□□□□□ -0.92
CHD8-205ENST00000553651 ZNF711Q9Y462 761 aa9.31□□□□□ -0.92
CHD8-205ENST00000553651 E7EQ34 232 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 CCL21O00585 134 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 SOCS6O14544 535 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 GPR39O43194 453 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 WISP2O76076 250 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 HBQ1P09105 142 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 PVRP15151 417 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 ITGAXP20702 1163 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 AGXTP21549 392 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 CDH3P22223 829 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 CA4P22748 312 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 CCNCP24863 283 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 PRDX3P30048 256 aaKnown RBP9.3□□□□□ -0.92
CHD8-205ENST00000553651 CD86P42081 329 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 ARSEP51690 589 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 Q0VFX4 171 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 BECN1Q14457 450 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 PAFAH1B3Q15102 231 aaKnown RBP9.3□□□□□ -0.92
CHD8-205ENST00000553651 DPCR1Q3MIW9 517 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 BOLA3Q53S33 107 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 C1orf189Q5VU69 101 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 AGAP7PQ5VUJ5 663 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 NCBP2-AS2Q69YL0 99 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 XKRXQ6PP77 449 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 FAM71BQ8TC56 605 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 HSPH1Q92598 858 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 TADA1Q96BN2 335 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 CNDP1Q96KN2 507 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 AGAP4Q96P64 663 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 TREX2Q9BQ50 279 aaPredicted RBP9.3□□□□□ -0.92
CHD8-205ENST00000553651 WWP1Q9H0M0 922 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 FAM60AQ9NP50 221 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 RAD18Q9NS91 495 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 SUCOQ9UBS9 1254 aaKnown RBP9.3□□□□□ -0.92
CHD8-205ENST00000553651 SERTAD3Q9UJW9 196 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 SPO11Q9Y5K1 396 aa9.3□□□□□ -0.92
CHD8-205ENST00000553651 DNMT3AQ9Y6K1 912 aaPredicted RBP9.3□□□□□ -0.92
CHD8-205ENST00000553651 TRGV8A0A0C4DH27 118 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 CCDC66A2RUB6 948 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 BTN3A3O00478 584 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 GAPDHSO14556 408 aaPredicted RBP9.29□□□□□ -0.92
CHD8-205ENST00000553651 KLHL18O94889 574 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 CD48P09326 243 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 CD1EP15812 388 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 HLA-DPA1P20036 260 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 AGAP20933 346 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 EEF1GP26641 437 aaKnown RBP9.29□□□□□ -0.92
CHD8-205ENST00000553651 MST1P26927 711 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 PBX1P40424 430 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 GCGRP47871 477 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 DCDP81605 110 aaKnown RBP9.29□□□□□ -0.92
CHD8-205ENST00000553651 SLC25A11Q02978 314 aaKnown RBP9.29□□□□□ -0.92
CHD8-205ENST00000553651 XRCC4Q13426 336 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 SLC9A5Q14940 896 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 PRKD1Q15139 912 aaPredicted RBP9.29□□□□□ -0.92
CHD8-205ENST00000553651 KRT31Q15323 416 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 ZIC1Q15915 447 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 CYP2A13Q16696 494 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 ARMC6Q6NXE6 501 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 KIRREL2Q6UWL6 708 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 GFRALQ6UXV0 394 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 IRF2BP2Q7Z5L9 587 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 OR4E2Q8NGC2 313 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 TEKT4Q8WW24 435 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 NACC2Q96BF6 587 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 HDAC11Q96DB2 347 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 RMDN2Q96LZ7 410 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 C12orf66Q96MD2 445 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 C17orf62Q9BQA9 187 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 ADGRE3Q9BY15 652 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 SPRTNQ9H040 489 aaPredicted RBP9.29□□□□□ -0.92
CHD8-205ENST00000553651 KLHL25Q9H0H3 589 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 MCCC2Q9HCC0 563 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 IL26Q9NPH9 171 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 DHCR7Q9UBM7 475 aaKnown RBP9.29□□□□□ -0.92
CHD8-205ENST00000553651 TTLL3Q9Y4R7 772 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 HS3ST3B1Q9Y662 390 aa9.29□□□□□ -0.92
CHD8-205ENST00000553651 NSD1Q96L73 2696 aaPredicted RBP9.29□□□□□ -0.92
CHD8-205ENST00000553651 FLNAP21333 2647 aaKnown RBP9.29□□□□□ -0.92
CHD8-205ENST00000553651 SNRNP200O75643 2136 aaKnown RBP9.28□□□□□ -0.92
CHD8-205ENST00000553651 OR2AG2A6NM03 316 aa9.28□□□□□ -0.92
CHD8-205ENST00000553651 TMCO5BA8MYB1 307 aa9.28□□□□□ -0.92
CHD8-205ENST00000553651 BTN3A1O00481 513 aa9.28□□□□□ -0.92
CHD8-205ENST00000553651 SGTAO43765 313 aa9.28□□□□□ -0.92
CHD8-205ENST00000553651 UGT1A9O60656 530 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms