RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 LENG8Q96PV6 779 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-221ENST00000553498 HGH1Q9BTY7 390 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 SLC25A23Q9BV35 468 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 MRPL1Q9BYD6 325 aaKnown RBP7.19□□□□□ -1.26
ATXN3-221ENST00000553498 DENND2DQ9H6A0 471 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-221ENST00000553498 MID1IP1Q9NPA3 183 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 SUN2Q9UH99 717 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 PCTPQ9UKL6 214 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 CDH7Q9ULB5 785 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 MKL2Q9ULH7 1088 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 DNAJC15Q9Y5T4 150 aa7.19□□□□□ -1.26
ATXN3-221ENST00000553498 COPG1Q9Y678 874 aaKnown RBP7.19□□□□□ -1.26
ATXN3-221ENST00000553498 NPEPPSL1A6NEC2 478 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 C16orf96A6NNT2 1141 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 HEPACAM2A8MVW5 462 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 C1QTNF3-AMACRE9PGA6 284 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 IFRD1O00458 451 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 E2F3O00716 465 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 NEMP1O14524 444 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 WNT9AO14904 365 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 LEFTY1O75610 366 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 WDR47O94967 919 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 TRIM16O95361 564 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 NPPAP01160 153 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 SNRPB2P08579 225 aaKnown RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 ANXA5P08758 320 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 C1SP09871 688 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 HIST1H2AGP0C0S8 130 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 ATP1B2P14415 290 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 MYOGP15173 224 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 LBPP18428 481 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 HIST1H2ADP20671 130 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 ITGAXP20702 1163 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 GKP32189 559 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 GGT5P36269 586 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 MMP12P39900 470 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 NRIP1P48552 1158 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 PSMD8P48556 350 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 MTTPP55157 894 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 CREB5Q02930 508 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 PTK2BQ14289 1009 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 CBX2Q14781 532 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 SHHQ15465 462 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 ATP13A5Q4VNC0 1218 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 C9orf50Q5SZB4 431 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 RARS2Q5T160 578 aaKnown RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 HENMT1Q5T8I9 393 aaKnown RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 FAM46CQ5VWP2 391 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 TMEM215Q68D42 235 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 PRMT9Q6P2P2 845 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 SBSNQ6UWP8 590 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 TMC5Q6UXY8 1006 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 GPRIN3Q6ZVF9 776 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 LRRC70Q7Z2Q7 622 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 ADGRG6Q86SQ4 1221 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 RBM23Q86U06 439 aaKnown RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 TSPAN33Q86UF1 283 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 YAF2Q8IY57 180 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 FAM9CQ8IZT9 166 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 FBXW8Q8N3Y1 598 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 PCYOX1LQ8NBM8 494 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 CHST14Q8NCH0 376 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 TRPC4APQ8TEL6 797 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 TWIST2Q8WVJ9 160 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 ING5Q8WYH8 240 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 ELSPBP1Q96BH3 223 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 ROPN1LQ96C74 230 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 ZNF514Q96K75 400 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 HIST1H2AHQ96KK5 128 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 FAM161BQ96MY7 647 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 SMIM14Q96QK8 99 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 HIST1H2AJQ99878 128 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 H2AFJQ9BTM1 129 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 THTPAQ9BU02 230 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 SPATA16Q9BXB7 569 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 SLC12A9Q9BXP2 914 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 UNKQ9C0B0 810 aaKnown RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 EBF2Q9HAK2 575 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 SLC28A3Q9HAS3 691 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 ZFP14Q9HCL3 533 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 SARS2Q9NP81 518 aaKnown RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 PCDH12Q9NPG4 1184 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 C11orf16Q9NQ32 467 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 STX18Q9P2W9 335 aaKnown RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 PTBP2Q9UKA9 531 aaKnown RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 ANGPTL2Q9UKU9 493 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 SARDHQ9UL12 918 aa7.18□□□□□ -1.26
ATXN3-221ENST00000553498 FNDC3AQ9Y2H6 1198 aaKnown RBP7.18□□□□□ -1.26
ATXN3-221ENST00000553498 A0A088AWK7 358 aa7.17□□□□□ -1.26
ATXN3-221ENST00000553498 LOC100653049A0A140TA62 436 aa7.17□□□□□ -1.26
ATXN3-221ENST00000553498 KLHL33A6NCF5 533 aa7.17□□□□□ -1.26
ATXN3-221ENST00000553498 TTC34A8MYJ7 566 aa7.17□□□□□ -1.26
ATXN3-221ENST00000553498 K7EPI3 171 aa7.17□□□□□ -1.26
ATXN3-221ENST00000553498 PEX11AO75192 247 aa7.17□□□□□ -1.26
ATXN3-221ENST00000553498 SKAP2O75563 359 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-221ENST00000553498 KRT34O76011 436 aa7.17□□□□□ -1.26
ATXN3-221ENST00000553498 SIX3O95343 332 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-221ENST00000553498 ELFN1P0C7U0 828 aa7.17□□□□□ -1.26
ATXN3-221ENST00000553498 EBLN1P0CF75 366 aa7.17□□□□□ -1.26
ATXN3-221ENST00000553498 PRR35P0CG20 571 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms