RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	AGAP11	Q8TF27	550 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	UBXN4	Q92575	508 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	SCAMP4	Q969E2	229 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ECHDC3	Q96DC8	303 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	THOC3	Q96J01	351 aa	Known RBP	5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	C1orf74	Q96LT6	269 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ZNF641	Q96N77	438 aa	Predicted RBP	5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	IP6K3	Q96PC2	410 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	DMRTA2	Q96SC8	542 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	CPXM1	Q96SM3	734 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	MESP1	Q9BRJ9	268 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	TLR10	Q9BXR5	811 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	LRRC27	Q9C0I9	530 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	MAGEH1	Q9H213	219 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	OSGEPL1	Q9H4B0	414 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ACTR5	Q9H9F9	607 aa	Predicted RBP	5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	UCK1	Q9HA47	277 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	RAD18	Q9NS91	495 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	IL17C	Q9P0M4	197 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	EPHA6	Q9UF33	1036 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	GPN3	Q9UHW5	284 aa	Predicted RBP	5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	NEU3	Q9UQ49	428 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	CDYL	Q9Y232	598 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	PADI2	Q9Y2J8	665 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ABCA1	O95477	2261 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	SVEP1	Q4LDE5	3571 aa		5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	YLPM1	P49750	1951 aa	Known RBP	5.73	□□□□□ -1.49
RACGAP1-223	ENST00000551260	USF3	Q68DE3	2245 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	FAM237B	A0A1B0GVD1	139 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	FAM95C	A0A1B0GW59	222 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	CCDC66	A2RUB6	948 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ANKRD33B	A6NCL7	494 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	OR52A4P	A6NMU1	304 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	TMEM150C	B9EJG8	249 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260		C9J4A7	227 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	PHF1	O43189	567 aa	Predicted RBP	5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	CALU	O43852	315 aa	Predicted RBP	5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	RAMP2	O60895	175 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	HEXIM1	O94992	359 aa	Known RBP	5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	RASAL1	O95294	804 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	IGHE	P01854	428 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	PYGM	P11217	842 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	SLC2A4	P14672	509 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	GSTT1	P30711	240 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ETFB	P38117	255 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	HADHA	P40939	763 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	TNFSF10	P50591	281 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	NKX6-1	P78426	367 aa	Predicted RBP	5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ARG2	P78540	354 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	HSD11B2	P80365	405 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	HSF1	Q00613	529 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	AMPD3	Q01432	767 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	MTA1	Q13330	715 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	INO80D	Q53TQ3	878 aa	Predicted RBP	5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ZNF648	Q5T619	568 aa	Predicted RBP	5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	C1orf189	Q5VU69	101 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	OLFML1	Q6UWY5	402 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	PAMR1	Q6UXH9	720 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ISLR2	Q6UXK2	745 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	CEP128	Q6ZU80	1094 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	B4GALNT4	Q76KP1	1039 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	CAMKMT	Q7Z624	323 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	C11orf96	Q7Z7L8	435 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	SRL	Q86TD4	932 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	MARVELD2	Q8N4S9	558 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	TAB3	Q8N5C8	712 aa	Predicted RBP	5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	WDTC1	Q8N5D0	677 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	PAF1	Q8N7H5	531 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	AMER2	Q8N7J2	671 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	SIMC1	Q8NDZ2	872 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	COX14	Q96I36	57 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	SMIM14	Q96QK8	99 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ABCG8	Q9H221	673 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ACSS3	Q9H6R3	686 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	SLC40A1	Q9NP59	571 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	ARFGAP3	Q9NP61	516 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	KLC4	Q9NSK0	619 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	TRIM10	Q9UDY6	481 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	PPT2	Q9UMR5	302 aa		5.72	□□□□□ -1.49
RACGAP1-223	ENST00000551260	KIAA1549	Q9HCM3	1950 aa		5.71	□□□□□ -1.49
RACGAP1-223	ENST00000551260	TENM1	Q9UKZ4	2725 aa		5.71	□□□□□ -1.49
RACGAP1-223	ENST00000551260	PVALEF	A0A1B0GWK0	134 aa		5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	UBA6	A0AVT1	1052 aa	Predicted RBP	5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	NPIPB15	A6NHN6	443 aa	Predicted RBP	5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	OR5K4	A6NMS3	321 aa		5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	FAM227A	F5H4B4	570 aa		5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260		J3KR12	359 aa		5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	TRAFD1	O14545	582 aa	Predicted RBP	5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	TMPRSS2	O15393	492 aa		5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	HTRA2	O43464	458 aa	Predicted RBP	5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	FBXO24	O75426	580 aa		5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	LETM1	O95202	739 aa	Predicted RBP	5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	CRYAB	P02511	175 aa	Known RBP	5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	RAF1	P04049	648 aa		5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	ERBB2	P04626	1255 aa		5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	GLI1	P08151	1106 aa		5.71	□□□□□ -1.5
RACGAP1-223	ENST00000551260	BRAF	P15056	766 aa		5.71	□□□□□ -1.5

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