RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 ZRANB2O95218 330 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTCH1-218ENST00000548945 RALBP11234 206 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 TNNT1P13805 278 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 VARSP26640 1264 aaKnown RBP12.51□□□□□ -0.41
PTCH1-218ENST00000548945 PBLDP30039 288 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-218ENST00000548945 GEMP55040 296 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 ADCY2Q08462 1091 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 PLEKHS1Q5SXH7 462 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 FHL5Q5TD97 284 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 KAZNQ674X7 775 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 DUS1LQ6P1R4 473 aaKnown RBP12.51□□□□□ -0.41
PTCH1-218ENST00000548945 RCOR2Q8IZ40 523 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 SLC38A9Q8NBW4 561 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 ACVR1CQ8NER5 493 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-218ENST00000548945 HM13Q8TCT9 377 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 HEXDCQ8WVB3 486 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 ULK4Q96C45 1275 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 RMDN2Q96LZ7 410 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 DPH2Q9BQC3 489 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-218ENST00000548945 GBA3Q9H227 469 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 CHST8Q9H2A9 424 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 ASB8Q9H765 288 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 SOHLH2Q9NX45 425 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 RSPH14Q9UHP6 348 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 G3BP2Q9UN86 482 aaKnown RBP12.51□□□□□ -0.41
PTCH1-218ENST00000548945 MAP4K5Q9Y4K4 846 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 HYOU1Q9Y4L1 999 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 ALG6Q9Y672 507 aa12.51□□□□□ -0.41
PTCH1-218ENST00000548945 CACNA1DQ01668 2161 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 POLEQ07864 2286 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 ARGFXA6NJG6 315 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 APOC4-APOC2K7ER74 178 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 MAP3K7O43318 606 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 SGTAO43765 313 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 DPM1O60762 260 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 MFAP3LO75121 409 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 AGFG2O95081 481 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 APOC2P02655 101 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 CDH3P22223 829 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 RORAP35398 523 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 PTGIRP43119 386 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 UQCRFS1P47985 274 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 PRLHRP49683 370 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 CCL11P51671 97 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 KRT33BQ14525 404 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 C4orf17Q53FE4 359 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 ITPRIPL1Q6GPH6 555 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 RANBP10Q6VN20 620 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 BBS12Q6ZW61 710 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 MED25Q71SY5 747 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 DET1Q7L5Y6 550 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 VSTM4Q8IW00 320 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 TMEM102Q8N9M5 508 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-218ENST00000548945 OR4K2Q8NGD2 314 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 DCUN1D1Q96GG9 259 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 RBM41Q96IZ5 413 aaKnown RBP12.5□□□□□ -0.41
PTCH1-218ENST00000548945 FERMT1Q9BQL6 677 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 PITPNM3Q9BZ71 974 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 CUEDC1Q9NWM3 386 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-218ENST00000548945 TCFL5Q9UL49 500 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 SNX7Q9UNH6 387 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 ARL5AQ9Y689 179 aa12.5□□□□□ -0.41
PTCH1-218ENST00000548945 SNRNP200O75643 2136 aaKnown RBP12.5□□□□□ -0.41
PTCH1-218ENST00000548945 SLC9B1P1A6NJY1 282 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 CFAP99D6REC4 459 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 F5H423 210 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-218ENST00000548945 TMEM63AO94886 807 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 CRTAMO95727 393 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 AGTP01019 485 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 HBQ1P09105 142 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 POLR2CP19387 275 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-218ENST00000548945 GNLYP22749 145 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 ADRA1AP35348 466 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 CD151P48509 253 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 VAV2P52735 878 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 RRADP55042 308 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 XIAPP98170 497 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 ABRQ12979 859 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 CHAF1BQ13112 559 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 NADK2Q4G0N4 442 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 LURAP1LQ8IV03 231 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 CNGA4Q8IV77 575 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 CFAP206Q8IYR0 622 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 NXPE1Q8N323 547 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 ENDOVQ8N8Q3 282 aaKnown RBP12.49□□□□□ -0.41
PTCH1-218ENST00000548945 GLIS1Q8NBF1 620 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 OR4E2Q8NGC2 313 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 LCN9Q8WX39 176 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 ANP32BQ92688 251 aaKnown RBP12.49□□□□□ -0.41
PTCH1-218ENST00000548945 CLIP3Q96DZ5 547 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 PPP1R2P1Q96PQ5 205 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 GORASP1Q9BQQ3 440 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 FICDQ9BVA6 458 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 TLR10Q9BXR5 811 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 SRMSQ9H3Y6 488 aa12.49□□□□□ -0.41
PTCH1-218ENST00000548945 TFB2MQ9H5Q4 396 aaKnown RBP12.49□□□□□ -0.41
PTCH1-218ENST00000548945 ACTR5Q9H9F9 607 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-218ENST00000548945 PLEKHB1Q9UF11 243 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-218ENST00000548945 FKBPLQ9UIM3 349 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms