RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ING4Q9UNL4 249 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 GMPPBQ9Y5P6 360 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 CCDC182A6NF36 153 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 SAGE2PA6NJ88 616 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ARVCFO00192 962 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 CXCR6O00574 342 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 FFAR2O15552 330 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 STK16O75716 305 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 PENKP01210 267 aaPredicted RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 C8GP07360 202 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 MAPK9P45984 424 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ACADVLP49748 655 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 GALK1P51570 392 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 UFM1P61960 85 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 GALNT1Q10472 559 aaPredicted RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 ABRQ12979 859 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 INO80DQ53TQ3 878 aaPredicted RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 ZCCHC8Q6NZY4 707 aaKnown RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 KDELC1Q6UW63 502 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 C11orf96Q7Z7L8 435 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 CLEC14AQ86T13 490 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ARHGAP12Q8IWW6 846 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 RAVER1Q8IY67 606 aaKnown RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 REM2Q8IYK8 340 aaPredicted RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 SLAIN1Q8ND83 568 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ZMIZ2Q8NF64 920 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 UBASH3BQ8TF42 649 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 TRIB2Q92519 343 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 HPS1Q92902 700 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 REXO5Q96IC2 774 aaKnown RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 PANX1Q96RD7 426 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ACTR3BQ9P1U1 418 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 GABRQQ9UN88 632 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 TMED5Q9Y3A6 229 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 TMEM88BA6NKF7 163 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 NEDD8-MDP1E9PL57 170 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 FPGTO14772 594 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 SGTAO43765 313 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 XYLBO75191 536 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 GUCY1B2O75343 617 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 NPPAP01160 153 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 SPATA31D3P0C874 917 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ITPKAP23677 461 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 MAGEA12P43365 314 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 CLCN2P51788 898 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 MTPNP58546 118 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 NOGQ13253 232 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 CEACAM7Q14002 265 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 PLCL1Q15111 1095 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 FNDC3BQ53EP0 1204 aaKnown RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 ADGRF1Q5T601 910 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ERICH5Q6P6B1 374 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 SPATA31D4Q6ZUB0 917 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 KRT74Q7RTS7 529 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 SCD5Q86SK9 330 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 LRRTM3Q86VH5 581 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 HID1Q8IV36 788 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 POC5Q8NA72 575 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ZBTB8BQ8NAP8 495 aaPredicted RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 CANT1Q8WVQ1 401 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ESAMQ96AP7 390 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 TRIM39Q9HCM9 518 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 IFT80Q9P2H3 777 aaPredicted RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 PCDHGA7Q9Y5G6 932 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 KIAA1217Q5T5P2 1943 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 A0A1W2PQ45 241 aaPredicted RBP5.69□□□□□ -1.5
VPS50-220ENST00000544910 A0A1W2PQY0 241 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 HHLA1C9JL84 531 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 FKTNO75072 461 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 OAZ2O95190 189 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 INHAP05111 366 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 FABP3P05413 133 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 ALPIP09923 528 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 RPIAP49247 311 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 SPIDRQ14159 915 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 OR4D1Q15615 310 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 MAVSQ7Z434 540 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 NECAB2Q7Z6G3 386 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 PNPT1Q8TCS8 783 aaKnown RBP5.69□□□□□ -1.5
VPS50-220ENST00000544910 CYP2S1Q96SQ9 504 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 TSEN34Q9BSV6 310 aaKnown RBP5.69□□□□□ -1.5
VPS50-220ENST00000544910 SERHL2Q9H4I8 314 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 SERHLQ9NQF3 203 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 MARCH4Q9P2E8 410 aaPredicted RBP5.69□□□□□ -1.5
VPS50-220ENST00000544910 TDRKHQ9Y2W6 561 aaKnown RBP5.69□□□□□ -1.5
VPS50-220ENST00000544910 NME7Q9Y5B8 376 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 GPC6Q9Y625 555 aaPredicted RBP5.69□□□□□ -1.5
VPS50-220ENST00000544910 RGPD3A6NKT7 1758 aaPredicted RBP5.69□□□□□ -1.5
VPS50-220ENST00000544910 RGPD4Q7Z3J3 1758 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 A0A1W2PP18 115 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 A0A1W2PQ67 120 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 ANKRD66B4E2M5 251 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 H0YJX3 145 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 TNFRSF21O75509 655 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 CBSLP0DN79 551 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 CBSP35520 551 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 PPM1AP35813 382 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 CPOXP36551 454 aa5.69□□□□□ -1.5
VPS50-220ENST00000544910 RPL3P39023 403 aaKnown RBP5.69□□□□□ -1.5
VPS50-220ENST00000544910 NFKB2Q00653 900 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms