RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 PRKCDQ05655 676 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 TIGD6Q17RP2 521 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 SCGB2B2Q4G0G5 96 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 PDE12Q6L8Q7 609 aaKnown RBP15.24■□□□□ 0.03
CHD4-210ENST00000544040 RANBP3LQ86VV4 465 aaPredicted RBP15.24■□□□□ 0.03
CHD4-210ENST00000544040 AMIGO1Q86WK6 493 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 TAPBPLQ9BX59 468 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 LOC100509620A0A075B734 347 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 DAPL1A0PJW8 107 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 MEIS2O14770 477 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 TULP3O75386 442 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 CDK14O94921 469 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 TPSB2P20231 275 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 PGDP52209 483 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 ADGRE1Q14246 886 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 TPSAB1Q15661 275 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 CLEC12AQ5QGZ9 265 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 FAM92BQ6ZTR7 304 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 PRSS58Q8IYP2 241 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 UNC5BQ8IZJ1 945 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 FBXO15Q8NCQ5 510 aaPredicted RBP15.24■□□□□ 0.03
CHD4-210ENST00000544040 TMEM203Q969S6 136 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 TMCO6Q96DC7 493 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 ZSWIM3Q96MP5 696 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 CXCL11O14625 94 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 REM1O75628 298 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 PRAMEF1O95521 474 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 GPIP06744 558 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 ZNF823P16415 610 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 AVPR1BP47901 424 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 KLHL26Q53HC5 615 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 PPP1R15BQ5SWA1 713 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 MSANTD2Q6P1R3 559 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 SYCE2Q6PIF2 218 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 PYROXD2Q8N2H3 581 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 IL31RAQ8NI17 732 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 HEXDCQ8WVB3 486 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 TUBGCP5Q96RT8 1024 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 CDH7Q9ULB5 785 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 C1RP00736 705 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 ACVR2AP27037 513 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 CORO1AP31146 461 aaKnown RBP15.23■□□□□ 0.03
CHD4-210ENST00000544040 CHIT1Q13231 466 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 DCLRE1AQ6PJP8 1040 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 ADGRD1Q6QNK2 874 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 CHRDL2Q6WN34 429 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 OR2L8Q8NGY9 312 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 KREMEN1Q96MU8 473 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 HTATIP2Q9BUP3 242 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 TECPR2O15040 1411 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 CCL16O15467 120 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 SCELO95171 688 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 SLC2A2P11168 524 aaPredicted RBP15.23■□□□□ 0.03
CHD4-210ENST00000544040 CD36P16671 472 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 IL12BP29460 328 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 RABGGTBP53611 331 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 ARPC4P59998 168 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 KLHL35Q6PF15 583 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 RASGEF1CQ8N431 466 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 RFT1Q96AA3 541 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 BARD1Q99728 777 aaKnown RBP15.23■□□□□ 0.03
CHD4-210ENST00000544040 PCDHAC1Q9H158 963 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 METTL8Q9H825 291 aaKnown RBP15.23■□□□□ 0.03
CHD4-210ENST00000544040 ABCA6Q8N139 1617 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 RNF225M0QZC1 329 aaPredicted RBP15.23■□□□□ 0.03
CHD4-210ENST00000544040 PRKD3O94806 890 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 OGNP20774 298 aaKnown RBP15.23■□□□□ 0.03
CHD4-210ENST00000544040 VGLL4Q14135 290 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 PLPP4Q5VZY2 271 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 ANKRA2Q9H9E1 313 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 CUEDC1Q9NWM3 386 aaPredicted RBP15.23■□□□□ 0.03
CHD4-210ENST00000544040 SPIN1Q9Y657 262 aaPredicted RBP15.23■□□□□ 0.03
CHD4-210ENST00000544040 VIPP01282 170 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 RLN2P04090 185 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 TIE1P35590 1138 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 GNA12Q03113 381 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 ZACNQ401N2 412 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 BRMS1LQ5PSV4 323 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 SLC22A15Q8IZD6 547 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 STOX2Q9P2F5 926 aaPredicted RBP15.23■□□□□ 0.03
CHD4-210ENST00000544040 FXYD6-FXYD2A0A087WZ82 144 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 ZNF12P17014 697 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 OR3A3P47888 321 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 OR3A2P47893 321 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 S100A10P60903 97 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 TAF10Q12962 218 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 OR2AJ1Q8NGZ0 328 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 CRELD1Q96HD1 420 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 RIPOR3Q96MK2 946 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 POLR2J2Q9GZM3 115 aaKnown RBP15.23■□□□□ 0.03
CHD4-210ENST00000544040 FXYD6Q9H0Q3 95 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 DNAAF2Q9NVR5 837 aaKnown RBP15.23■□□□□ 0.03
CHD4-210ENST00000544040 ALG5Q9Y673 324 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 SPHKAPQ2M3C7 1700 aa15.23■□□□□ 0.03
CHD4-210ENST00000544040 PER2O15055 1255 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 ARCN1P48444 511 aaKnown RBP15.22■□□□□ 0.03
CHD4-210ENST00000544040 LCP2Q13094 533 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 FSTL4Q6MZW2 842 aa15.22■□□□□ 0.03
CHD4-210ENST00000544040 TNFAIP8L2Q6P589 184 aaPredicted RBP15.22■□□□□ 0.03
CHD4-210ENST00000544040 INO80EQ8NBZ0 244 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms