RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-221ENST00000543545 SPDYE1Q8NFV5 336 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-221ENST00000543545 MAPK15Q8TD08 544 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 CD200R1Q8TD46 325 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 RHBDD1Q8TEB9 315 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 MTBPQ96DY7 904 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 LINGO1Q96FE5 620 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 RMDN2Q96LZ7 410 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 C12orf66Q96MD2 445 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 FERD3LQ96RJ6 166 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 MCMBPQ9BTE3 642 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 DHRS4Q9BTZ2 278 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 VPS11Q9H270 941 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 STN1Q9H668 368 aaKnown RBP9.94□□□□□ -0.82
CPSF7-221ENST00000543545 WASH6PQ9NQA3 447 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 SNX15Q9NRS6 342 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 SCHIP1Q9P0W5 487 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-221ENST00000543545 KLHL42Q9P2K6 505 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 CTNNAL1Q9UBT7 734 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 ASF1AQ9Y294 204 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 WDR37Q9Y2I8 494 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 MED16Q9Y2X0 877 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 CFAP20Q9Y6A4 193 aaKnown RBP9.94□□□□□ -0.82
CPSF7-221ENST00000543545 WDFY4Q6ZS81 3184 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 DOCK9Q9BZ29 2069 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 KIR2DS5A0A0G2JLQ3 304 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 A0A0G2JNG1 304 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 GOLGA6L10A6NI86 522 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 OR52A4PA6NMU1 304 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 KIR2DS3K7RE56 304 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 FLRT2O43155 660 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 SH3BP5O60239 455 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 SLCO2B1O94956 709 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 EML2O95834 649 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 CBSLP0DN79 551 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 MYF5P13349 255 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 ENO3P13929 434 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-221ENST00000543545 CD9P21926 228 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 CBSP35520 551 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 MAZP56270 477 aaKnown RBP9.93□□□□□ -0.82
CPSF7-221ENST00000543545 TIAL1Q01085 375 aaKnown RBP eCLIP9.93□□□□□ -0.825e-6■■■■□ 21
CPSF7-221ENST00000543545 KIR2DS5Q14953 304 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 CLCA4Q14CN2 919 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 NR0B2Q15466 257 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 RPE65Q16518 533 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 ZNF658BQ4V348 819 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-221ENST00000543545 C6orf132Q5T0Z8 1188 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 ZCCHC8Q6NZY4 707 aaKnown RBP9.93□□□□□ -0.82
CPSF7-221ENST00000543545 TTC23LQ6PF05 361 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 LRIG3Q6UXM1 1119 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 PIWIL4Q7Z3Z4 852 aaKnown RBP9.93□□□□□ -0.82
CPSF7-221ENST00000543545 CROCCP2Q86T23 111 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 TBC1D1Q86TI0 1168 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-221ENST00000543545 PDZD3Q86UT5 571 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 TDRPQ86YL5 185 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 SFTPA2Q8IWL1 248 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 SLC22A15Q8IZD6 547 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 IQCKQ8N0W5 287 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 CNPY4Q8N129 248 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 SPATA6LQ8N4H0 392 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 NKAPQ8N5F7 415 aaKnown RBP9.93□□□□□ -0.82
CPSF7-221ENST00000543545 ARL10Q8N8L6 244 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 PHC3Q8NDX5 983 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 OR4C6Q8NH72 309 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 GIMAP7Q8NHV1 300 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 EEF1AKMT1Q8WVE0 214 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 PATE1Q8WXA2 126 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 TFGQ92734 400 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-221ENST00000543545 TSNARE1Q96NA8 513 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 ZIM3Q96PE6 472 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 INSM2Q96T92 566 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-221ENST00000543545 OR52A5Q9H2C5 316 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 POPDC3Q9HBV1 291 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 EVA1BQ9NVM1 165 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 ACOT9Q9Y305 439 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 HEBP2Q9Y5Z4 205 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 COLEC10Q9Y6Z7 277 aa9.93□□□□□ -0.82
CPSF7-221ENST00000543545 EP300Q09472 2414 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-221ENST00000543545 A0A087X1B8 175 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 A0A096LPK6 155 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 HMX2A2RU54 273 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 CPED1A4D0V7 1026 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 PABPN1LA6NDY0 278 aaKnown RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 PRR19A6NJB7 356 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 RHPN2P1A8MT19 583 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 RGS16O15492 202 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 LDOC1O95751 146 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 RPN2P04844 631 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 MPOP05164 745 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 C2P06681 752 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 CCDC166P0CW27 439 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 GIMD1P0DJR0 217 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 MPC1LP0DKB6 136 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 MTHFD1P11586 935 aaKnown RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 CD59P13987 128 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 BRAFP15056 766 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 MAP4P27816 1152 aaKnown RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 ATP5DP30049 168 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 SLC19A1P41440 591 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 DUSP3P51452 185 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 ZNF844Q08AG5 666 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms