RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SGCBQ16585 318 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 MEP1AQ16819 746 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 WSCD2Q2TBF2 565 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 ANKDD1AQ495B1 522 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 AARDQ4LEZ3 155 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 LY6G5CQ5SRR4 150 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 TAF3Q5VWG9 929 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 NSUN5P2Q63ZY6 315 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 FIGLAQ6QHK4 219 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 TPRG1Q6ZUI0 275 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 MIER3Q7Z3K6 550 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 C4orf19Q8IY42 314 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 BBS10Q8TAM1 723 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 TBC1D16Q8TBP0 767 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 NSMAFQ92636 917 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 N4BP2L2Q92802 583 aaPredicted RBP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 TRIM44Q96DX7 344 aaPredicted RBP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 ERLEC1Q96DZ1 483 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 SPDL1Q96EA4 605 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 ZNF503Q96F45 646 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 OTUB1Q96FW1 271 aaPredicted RBP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 ZNF333Q96JL9 665 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 RITA1Q96K30 269 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 CRAMP1Q96RY5 1269 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 IWS1Q96ST2 819 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 GTPBP2Q9BX10 602 aaKnown RBP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 OSBPL8Q9BZF1 889 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 NPFFR1Q9GZQ6 430 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 TMEM39BQ9GZU3 492 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 WNT5BQ9H1J7 359 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 PNNQ9H307 717 aaKnown RBP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 FN3KQ9H479 309 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 ESRP2Q9H6T0 727 aaKnown RBP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 AKIRIN1Q9H9L7 192 aaPredicted RBP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 TBC1D17Q9HA65 648 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 LMAN1LQ9HAT1 526 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 ZBTB40Q9NUA8 1239 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 SLC9A2Q9UBY0 812 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 UTS2RQ9UKP6 389 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 AURKCQ9UQB9 309 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 SLC4A4Q9Y6R1 1079 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 DHX29Q7Z478 1369 aaKnown RBP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 CAMSAP2Q08AD1 1489 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 BCL9LQ86UU0 1499 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 GPATCH8Q9UKJ3 1502 aaKnown RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 KDM5AP29375 1690 aaKnown RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 SDR42E2A6NKP2 422 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 F8W810 466 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 PTGESO14684 152 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 TTI1O43156 1089 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 TSPAN1O60635 241 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 LETM1O95202 739 aaPredicted RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 PGLSO95336 258 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 TRIM16O95361 564 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 ESRRBO95718 433 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 PEX11BO96011 259 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 RAB40ALP0C0E4 278 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 DANCRP0C864 163 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 ENO3P13929 434 aaPredicted RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 DDX5P17844 614 aaKnown RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 KCNA5P22460 613 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 ACAT1P24752 427 aaKnown RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 HOXD9P28356 352 aaPredicted RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 TIA1P31483 386 aaKnown RBP eCLIP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 TNFSF8P32971 234 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 EIF2S3P41091 472 aaKnown RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 FRKP42685 505 aaPredicted RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 AVPR1BP47901 424 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 FASLGP48023 281 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 SLC26A5P58743 744 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 SNRPEP62304 92 aaKnown RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 IRX3P78415 501 aaPredicted RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 CDK3Q00526 305 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 GFPT1Q06210 699 aaPredicted RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 GRIK2Q13002 908 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 MVPQ14764 893 aaKnown RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 EIF2S3LQ2VIR3 472 aaKnown RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 USP39Q53GS9 565 aaKnown RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 HSP90AA5PQ58FG0 334 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 TSTD2Q5T7W7 516 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 C12orf60Q5U649 245 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 TXNRD3NBQ6F5E7 133 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 SLC27A1Q6PCB7 646 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 OLFM4Q6UX06 510 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 IRF2BP2Q7Z5L9 587 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 GRASPQ7Z6J2 395 aaPredicted RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 CAMK1DQ8IU85 385 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 CCDC83Q8IWF9 413 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 TBC1D21Q8IYX1 336 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 RASGEF1CQ8N431 466 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 IPMKQ8NFU5 416 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 CEP76Q8TAP6 659 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 URGCPQ8TCY9 931 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 RAD54LQ92698 747 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 EXTL1Q92935 676 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 SLAMF9Q96A28 289 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 TMEM18Q96B42 140 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 EEF2KMTQ96G04 330 aa3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 RBM18Q96H35 190 aaKnown RBP3.85□□□□□ -1.79
SFSWAP-211ENST00000542813 PDLIM2Q96JY6 352 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms