RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 GXYLT1Q4G148 440 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 RNASEH2BQ5TBB1 312 aaKnown RBP5.46□□□□□ -1.54
DDB1-219ENST00000541513 C6orf163Q5TEZ5 329 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 SERTAD4-AS1Q5TG53 156 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 ANXA8L1Q5VT79 327 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 FKBP1CQ5VVH2 108 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 METTL11BQ5VVY1 283 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 PRAMEF8Q5VWM4 474 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 FCRLBQ6BAA4 426 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 ZSCAN25Q6NSZ9 544 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 APOBEC3HQ6NTF7 200 aaKnown RBP5.46□□□□□ -1.54
DDB1-219ENST00000541513 ETV3LQ6ZN32 361 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 PRR23CQ6ZRP0 262 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 SLC15A3Q8IY34 581 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 EFCAB13Q8IY85 973 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 LRRC56Q8IYG6 542 aaPredicted RBP5.46□□□□□ -1.54
DDB1-219ENST00000541513 CARFQ8N187 725 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 ARMC10Q8N2F6 343 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 FITM2Q8N6M3 262 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 LINC00469Q8N7U9 141 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.46□□□□□ -1.54
DDB1-219ENST00000541513 L3MBTL4Q8NA19 623 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 CCNYQ8ND76 341 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 SLC35B2Q8TB61 432 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 GOLGA5Q8TBA6 731 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 GPT2Q8TD30 523 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 ROBO4Q8WZ75 1007 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 INPP5DQ92835 1189 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 LPPQ93052 612 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 UTP4Q969X6 686 aaKnown RBP5.46□□□□□ -1.54
DDB1-219ENST00000541513 DTD2Q96FN9 168 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 SECISBP2Q96T21 854 aaKnown RBP5.46□□□□□ -1.54
DDB1-219ENST00000541513 GPA33Q99795 319 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 CCT7Q99832 543 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 SMOQ99835 787 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 DDX50Q9BQ39 737 aaKnown RBP5.46□□□□□ -1.54
DDB1-219ENST00000541513 PIGQQ9BRB3 760 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 CARD9Q9H257 536 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 PLEKHA4Q9H4M7 779 aa5.46□□□□□ -1.54
DDB1-219ENST00000541513 MRPS17Q9Y2R5 130 aaKnown RBP5.46□□□□□ -1.54
DDB1-219ENST00000541513 LAMB1P07942 1786 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 A0A0U1RQS6 177 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 ZC3H12DA2A288 527 aaKnown RBP5.45□□□□□ -1.54
DDB1-219ENST00000541513 PMS2P1A4D2B8 440 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 FAM47DPA6NHR8 397 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 ZNF716A6NP11 495 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 CAPN14A8MX76 684 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 ZNF213O14771 459 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 SMAD9O15198 467 aaKnown RBP5.45□□□□□ -1.54
DDB1-219ENST00000541513 OIP5O43482 229 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 TLX2O43763 284 aaPredicted RBP5.45□□□□□ -1.54
DDB1-219ENST00000541513 SELENOFO60613 162 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 SCGB2A1O75556 95 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 BCL10O95999 233 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 ALDOAP04075 364 aaKnown RBP5.45□□□□□ -1.54
DDB1-219ENST00000541513 CSF2P04141 144 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 INHBBP09529 407 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 FURINP09958 794 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 ZNF735P0CB33 412 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 UBTFL6P0CB48 400 aaPredicted RBP5.45□□□□□ -1.54
DDB1-219ENST00000541513 TMEM225BP0DP42 221 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 RALAP11233 206 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 CALB2P22676 271 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 ACADLP28330 430 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 PTPN6P29350 595 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 MCM5P33992 734 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 ADCY8P40145 1251 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 CLRN1P58418 232 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 SHC2P98077 582 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 ECT2LQ008S8 904 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 TNFRSF17Q02223 184 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 TSTA3Q13630 321 aaPredicted RBP5.45□□□□□ -1.54
DDB1-219ENST00000541513 UBXN2BQ14CS0 331 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 SLC39A14Q15043 492 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 VWC2Q2TAL6 325 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 OR6B2Q6IFH4 312 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 CDC42EP5Q6NZY7 148 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 ACSM6Q6P461 480 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 DBX2Q6ZNG2 339 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 TMEM182Q6ZP80 229 aaPredicted RBP5.45□□□□□ -1.54
DDB1-219ENST00000541513 DOK3Q7L591 496 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 TSPAN33Q86UF1 283 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 CAND1Q86VP6 1230 aaKnown RBP5.45□□□□□ -1.54
DDB1-219ENST00000541513 APOBEC3FQ8IUX4 373 aaKnown RBP5.45□□□□□ -1.54
DDB1-219ENST00000541513 CCDC83Q8IWF9 413 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 CFAP52Q8N1V2 620 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 METTL25Q8N6Q8 603 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 GBP7Q8N8V2 638 aaPredicted RBP5.45□□□□□ -1.54
DDB1-219ENST00000541513 SETD9Q8NE22 299 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 NCOA7Q8NI08 942 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 POC1BQ8TC44 478 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 KCNJ9Q92806 393 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 SPSB1Q96BD6 273 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 MOAP1Q96BY2 351 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 PRMT6Q96LA8 375 aaPredicted RBP5.45□□□□□ -1.54
DDB1-219ENST00000541513 TBC1D32Q96NH3 1257 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 KLHL5Q96PQ7 755 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 PSKH2Q96QS6 385 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 GPR61Q9BZJ8 451 aa5.45□□□□□ -1.54
DDB1-219ENST00000541513 SPATC1LQ9H0A9 340 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms