RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 COX4I2Q96KJ9 171 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 TTC25Q96NG3 672 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 DMRTA2Q96SC8 542 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 METTL5Q9NRN9 209 aaKnown RBP9.14□□□□□ -0.95
YBX3-211ENST00000541351 RASSF1Q9NS23 344 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 ZNF358Q9NW07 568 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 IRAK4Q9NWZ3 460 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 APEX2Q9UBZ4 518 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 POMT2Q9UKY4 750 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 MTMR6Q9Y217 621 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.14□□□□□ -0.95
YBX3-211ENST00000541351 FHOD1Q9Y613 1164 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 COLEC10Q9Y6Z7 277 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 OR5H15A6NDH6 313 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 FAM90A27PA6NNH2 459 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 BECN2A8MW95 431 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 MAP2K7O14733 419 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 PSMA7O14818 248 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 ZSCAN9O15535 394 aaPredicted RBP9.13□□□□□ -0.95
YBX3-211ENST00000541351 WIPF1O43516 503 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 ACPPP15309 386 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 TNFAIP3P21580 790 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 SYKP43405 635 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 SPINT3P49223 89 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 RAB28P51157 221 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 NKX6-1P78426 367 aaPredicted RBP9.13□□□□□ -0.95
YBX3-211ENST00000541351 TRAF2Q12933 501 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 KRT33BQ14525 404 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 RPE65Q16518 533 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 C15orf59Q2T9L4 293 aaPredicted RBP9.13□□□□□ -0.95
YBX3-211ENST00000541351 CCDC14Q49A88 953 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 VWA3BQ502W6 1294 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 ABHD17BQ5VST6 288 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 FBXW10Q5XX13 1052 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 SCYL2Q6P3W7 929 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 KIRREL2Q6UWL6 708 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 C16orf47Q6ZP98 133 aaPredicted RBP9.13□□□□□ -0.95
YBX3-211ENST00000541351 RIPOR1Q6ZS17 1223 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 RFLNAQ6ZTI6 216 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 AMZ2Q86W34 360 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 TRAPPC5Q8IUR0 188 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 CPSF7Q8N684 471 aaKnown RBP9.13□□□□□ -0.95
YBX3-211ENST00000541351 EMC1Q8N766 993 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 PIH1D2Q8WWB5 315 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 CENPIQ92674 756 aaPredicted RBP9.13□□□□□ -0.95
YBX3-211ENST00000541351 MGME1Q9BQP7 344 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 SPATA16Q9BXB7 569 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 ZCCHC2Q9C0B9 1178 aaKnown RBP9.13□□□□□ -0.95
YBX3-211ENST00000541351 XPO4Q9C0E2 1151 aaKnown RBP9.13□□□□□ -0.95
YBX3-211ENST00000541351 SLC39A8Q9C0K1 460 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 NOD2Q9HC29 1040 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 NPDC1Q9NQX5 325 aaPredicted RBP9.13□□□□□ -0.95
YBX3-211ENST00000541351 IMP3Q9NV31 184 aaKnown RBP9.13□□□□□ -0.95
YBX3-211ENST00000541351 BEX4Q9NWD9 120 aaPredicted RBP9.13□□□□□ -0.95
YBX3-211ENST00000541351 TAS2R14Q9NYV8 317 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 LRFN1Q9P244 771 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 PTGFRNQ9P2B2 879 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 TRIM10Q9UDY6 481 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 CDYLQ9Y232 598 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 DOCK10Q96BY6 2186 aa9.13□□□□□ -0.95
YBX3-211ENST00000541351 C1orf232A0A0U1RR37 186 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 KLHL33A6NCF5 533 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 USP27XA6NNY8 438 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 FADS2P1A8MWK0 482 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 ALOX12BO75342 701 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 TOXO94900 526 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 BMP10O95393 424 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 MTHFD1P11586 935 aaKnown RBP9.12□□□□□ -0.95
YBX3-211ENST00000541351 PFKFB1P16118 471 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 BMP7P18075 431 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 CES1P23141 567 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 CMA1P23946 247 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 SOX11P35716 441 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 PRCPP42785 496 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 ZNF135P52742 658 aaPredicted RBP9.12□□□□□ -0.95
YBX3-211ENST00000541351 ARSFP54793 590 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 RPL26P61254 145 aaKnown RBP9.12□□□□□ -0.95
YBX3-211ENST00000541351 AP1B1Q10567 949 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 ATG9BQ674R7 924 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 HMBOX1Q6NT76 420 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 TRNP1Q6NT89 227 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 ADGRG6Q86SQ4 1221 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 DOLPP1Q86YN1 238 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 SMYD4Q8IYR2 804 aaPredicted RBP9.12□□□□□ -0.95
YBX3-211ENST00000541351 OR11G2Q8NGC1 345 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 BRSK1Q8TDC3 778 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 LRRC46Q96FV0 321 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 LYSMD1Q96S90 227 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 GPATCH1Q9BRR8 931 aaKnown RBP9.12□□□□□ -0.95
YBX3-211ENST00000541351 KIR3DX1Q9H7L2 352 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 PLA2G3Q9NZ20 509 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 IL1RAPL1Q9NZN1 696 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 SLC23A2Q9UGH3 650 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 ADAM21Q9UKJ8 722 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 RPL26L1Q9UNX3 145 aaKnown RBP9.12□□□□□ -0.95
YBX3-211ENST00000541351 LUC7L2Q9Y383 392 aaKnown RBP9.12□□□□□ -0.95
YBX3-211ENST00000541351 HEBP2Q9Y5Z4 205 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 HS3ST3B1Q9Y662 390 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 MXRA5Q9NR99 2828 aa9.12□□□□□ -0.95
YBX3-211ENST00000541351 NUP210LQ5VU65 1888 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms