RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 CHRNA6Q15825 494 aa11.32□□□□□ -0.6
C11orf54-214ENST00000540113 ZIK1Q3SY52 487 aaPredicted RBP11.32□□□□□ -0.6
C11orf54-214ENST00000540113 OTUD3Q5T2D3 398 aaPredicted RBP11.32□□□□□ -0.6
C11orf54-214ENST00000540113 GLYATQ6IB77 296 aa11.32□□□□□ -0.6
C11orf54-214ENST00000540113 TTC33Q6PID6 262 aaPredicted RBP11.32□□□□□ -0.6
C11orf54-214ENST00000540113 DLEU7Q6UYE1 221 aa11.32□□□□□ -0.6
C11orf54-214ENST00000540113 CHST15Q7LFX5 561 aaPredicted RBP11.32□□□□□ -0.6
C11orf54-214ENST00000540113 DDX53Q86TM3 631 aaKnown RBP11.32□□□□□ -0.6
C11orf54-214ENST00000540113 DCAF4L2Q8NA75 395 aa11.32□□□□□ -0.6
C11orf54-214ENST00000540113 CENPNQ96H22 339 aaPredicted RBP11.32□□□□□ -0.6
C11orf54-214ENST00000540113 TOX2Q96NM4 488 aa11.32□□□□□ -0.6
C11orf54-214ENST00000540113 HACD3Q9P035 362 aa11.32□□□□□ -0.6
C11orf54-214ENST00000540113 KLQ9UEF7 1012 aa11.32□□□□□ -0.6
C11orf54-214ENST00000540113 ANAPC2Q9UJX6 822 aa11.32□□□□□ -0.6
C11orf54-214ENST00000540113 DFNA5O60443 496 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 ZNF23P17027 643 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 CDH2P19022 906 aaPredicted RBP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 EMX2Q04743 252 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 FOXM1Q08050 763 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 NFATC2Q13469 925 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 COQ5Q5HYK3 327 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 C1orf53Q5VUE5 145 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 TMEM214Q6NUQ4 689 aaKnown RBP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 GAREM2Q75VX8 874 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 KRTCAP2Q8N6L1 136 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 FAM86B1Q8N7N1 296 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 CHID1Q9BWS9 393 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 MAGEE1Q9HCI5 957 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 SPG21Q9NZD8 308 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 PTTG2Q9NZH5 202 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 ZIM2Q9NZV7 527 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 MBD1Q9UIS9 605 aaPredicted RBP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 UTS2RQ9UKP6 389 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 ANGPTL3Q9Y5C1 460 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 ST14Q9Y5Y6 855 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 B3GALT4O96024 378 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 ZNF7P17097 686 aaPredicted RBP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 CD70P32970 193 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 RFC2P35250 354 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 BCL2L1Q07817 233 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 PPP1R8Q12972 351 aaKnown RBP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 DYNC1I2Q13409 638 aaKnown RBP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 PCBP2Q15366 365 aaKnown RBP eCLIP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 DGKKQ5KSL6 1271 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 INTS11Q5TA45 600 aaKnown RBP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 EFL1Q7Z2Z2 1120 aaKnown RBP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 HID1Q8IV36 788 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 DTWD1Q8N5C7 304 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 MYLIPQ8WY64 445 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 ISG20Q96AZ6 181 aaKnown RBP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 IKZF5Q9H5V7 419 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 CARS2Q9HA77 564 aaKnown RBP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 CLK4Q9HAZ1 481 aaKnown RBP11.31□□□□□ -0.6
C11orf54-214ENST00000540113 WWOXQ9NZC7 414 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 VAPAQ9P0L0 249 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 CRLS1Q9UJA2 301 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 ATP11BQ9Y2G3 1177 aa11.31□□□□□ -0.6
C11orf54-214ENST00000540113 ANKRD28O15084 1053 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 RAD51BO15315 384 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 LILRB3O75022 631 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 TRBC1P01850 177 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 NFKBIAP25963 317 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 ITGB8P26012 769 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 IST1P53990 364 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 ADARP55265 1226 aaKnown RBP11.3□□□□□ -0.6
C11orf54-214ENST00000540113 AP1S1P61966 158 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 MAP7Q14244 749 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 C11orf91Q3C1V1 193 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 GTDC1Q4AE62 458 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 ANKRD34AQ69YU3 496 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 DET1Q7L5Y6 550 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 ADAMTSL2Q86TH1 951 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 PTRH1Q86Y79 214 aaKnown RBP11.3□□□□□ -0.6
C11orf54-214ENST00000540113 BBS7Q8IWZ6 715 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 STK40Q8N2I9 435 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 GPR26Q8NDV2 337 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 FIG4Q92562 907 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 VOPP1Q96AW1 172 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 HIC2Q96JB3 615 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 HAUS8Q9BT25 410 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 TBCDQ9BTW9 1192 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 C9orf16Q9BUW7 83 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 LTB4R2Q9NPC1 389 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 LATS2Q9NRM7 1088 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 PTBP2Q9UKA9 531 aaKnown RBP11.3□□□□□ -0.6
C11orf54-214ENST00000540113 NEUROG3Q9Y4Z2 214 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 MYOFQ9NZM1 2061 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 GLYATL1P3A0A0U1RQE8 302 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 NPIPB15A6NHN6 443 aaPredicted RBP11.3□□□□□ -0.6
C11orf54-214ENST00000540113 LOC730098B7Z3J9 87 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 TMX2-CTNND1H3BSU7 103 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 CLOCKO15516 846 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 ZNF821O75541 412 aaPredicted RBP11.3□□□□□ -0.6
C11orf54-214ENST00000540113 RASAL1O95294 804 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 ASLP04424 464 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 GPIP06744 558 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 LAG3P18627 525 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 GABRR2P28476 465 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 EEFSECP57772 596 aaKnown RBP11.3□□□□□ -0.6
C11orf54-214ENST00000540113 LMAN2Q12907 356 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms