RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ADRA2CP18825 462 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 NMBRP28336 390 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TNFSF8P32971 234 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 GNAQP50148 359 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 HTR6P50406 440 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TAS2R40P59535 323 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 KIAA1024LP59773 190 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SLC20A2Q08357 652 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 Q0VFX4 171 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 NEXNQ0ZGT2 675 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 GRSF1Q12849 480 aaKnown RBP eCLIP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 RILPL1Q5EBL4 403 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 KCNT1Q5JUK3 1230 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SIGIRRQ6IA17 410 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF449Q6P9G9 518 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PSRC1Q6PGN9 363 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM65Q6PI78 240 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 Q6ZSV7 163 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TRAPPC11Q7Z392 1133 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ADHFE1Q8IWW8 467 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 DDIASQ8IXT1 998 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PM20D2Q8IYS1 436 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CHCHD4Q8N4Q1 142 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ZBTB2Q8N680 514 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 C10orf53Q8N6V4 93 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MAB21L3Q8N8X9 362 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PNLDC1Q8NA58 520 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 POC5Q8NA72 575 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SETD6Q8TBK2 473 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 RNASE8Q8TDE3 154 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 P2RX5Q93086 422 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CFAP36Q96G28 342 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 JAKMIP1Q96N16 626 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MS4A10Q96PG2 267 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CSF3RQ99062 836 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SLC30A2Q9BRI3 323 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MXRA8Q9BRK3 442 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SH2D4AQ9H788 454 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PELI2Q9HAT8 420 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CISD1Q9NZ45 108 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 IPO11Q9UI26 975 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SLC25A13Q9UJS0 675 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 AAR2Q9Y312 384 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SQORQ9Y6N5 450 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 COL2A1P02458 1487 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 GON4LQ3T8J9 2241 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 UBE4BO95155 1302 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 FER1L5A0AVI2 2057 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 NPC1L1Q9UHC9 1359 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 A0A1B0GWJ7 208 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MAGEA13PA6NCF6 341 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 HSPB6O14558 160 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 APBB3O95704 486 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 KRT6BP04259 564 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CAPN1P07384 714 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ETFAP13804 333 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ATP6V1B1P15313 513 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 NAGAP17050 411 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MUTP22033 750 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 GDF5P43026 501 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CRKLP46109 303 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 NRIP1P48552 1158 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 KRT6CP48668 564 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CYP2J2P51589 502 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 HNRNPH2P55795 449 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SELENOVP59797 346 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PTENP60484 403 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CSNK2A1P68400 391 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 IKQ13123 557 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 KRT33BQ14525 404 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 OASLQ15646 514 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 HFEQ30201 348 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MIDNQ504T8 468 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TOR1AIP1Q5JTV8 583 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM211Q6ICI0 200 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SLC9B2Q86UD5 537 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 GLCCI1Q86VQ1 547 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 FBXO39Q8N4B4 442 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CARNMT1Q8N4J0 409 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 AVL9Q8NBF6 648 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SLC4A11Q8NBS3 891 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CSNK2A3Q8NEV1 391 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 OR5T2Q8NGG2 359 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 OR5R1Q8NH85 324 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CKAP2Q8WWK9 683 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TRIB2Q92519 343 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 INPP5DQ92835 1189 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 NXNL1Q96CM4 212 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 RRNAD1Q96FB5 475 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PDLIM5Q96HC4 596 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 BBS4Q96RK4 519 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SLC39A3Q9BRY0 314 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 C16orf70Q9BSU1 422 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 RTN4RQ9BZR6 473 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PPP1R3EQ9H7J1 279 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 C10orf88Q9H8K7 445 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MTHFD2LQ9H903 347 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TBC1D17Q9HA65 648 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 RANGRFQ9HD47 186 aaPredicted RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms