RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 AARSD1Q9BTE6 412 aaKnown RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 RRAGDQ9NQL2 400 aaPredicted RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 INTS10Q9NVR2 710 aaKnown RBP12.79□□□□□ -0.36
CHFR-216ENST00000538235 CIDEBQ9UHD4 219 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 IKZF3Q9UKT9 509 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 PCDHB1Q9Y5F3 818 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 PCDHGA1Q9Y5H4 931 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 NFS1Q9Y697 457 aa12.79□□□□□ -0.36
CHFR-216ENST00000538235 IGHV1OR21-1A0A087WYE8 117 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 RPLP0P05388 317 aaKnown RBP12.78□□□□□ -0.36
CHFR-216ENST00000538235 OR56A5P0C7T3 313 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 HOXB3P14651 431 aaPredicted RBP12.78□□□□□ -0.36
CHFR-216ENST00000538235 XRCC1P18887 633 aaPredicted RBP12.78□□□□□ -0.36
CHFR-216ENST00000538235 CD1CP29017 333 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 HHEXQ03014 270 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 MGAT5Q09328 741 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 ZNF460Q14592 562 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 KYNUQ16719 465 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 ACSBG2Q5FVE4 666 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 TMEM207Q6UWW9 146 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 PDZD3Q86UT5 571 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 CCNJLQ8IV13 435 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 RASGRP3Q8IV61 690 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 SLC22A15Q8IZD6 547 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 PHC3Q8NDX5 983 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 OR5AR1Q8NGP9 310 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 FBF1Q8TES7 1133 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 ATXN7L3BQ96GX2 97 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 TCF12Q99081 682 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 FMO2Q99518 471 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 GPR21Q99679 349 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 MENTQ9BUN1 341 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 TMEM121BQ9BXQ6 578 aaPredicted RBP12.78□□□□□ -0.36
CHFR-216ENST00000538235 RDH14Q9HBH5 336 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 SLC40A1Q9NP59 571 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 SARS2Q9NP81 518 aaKnown RBP12.78□□□□□ -0.36
CHFR-216ENST00000538235 IMP3Q9NV31 184 aaKnown RBP12.78□□□□□ -0.36
CHFR-216ENST00000538235 GNPTGQ9UJJ9 305 aa12.78□□□□□ -0.36
CHFR-216ENST00000538235 KIR2DS5A0A0G2JLQ3 304 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 A0A0G2JNG1 304 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 HMX2A2RU54 273 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 D6RAR5 112 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 KIR2DS3K7RE56 304 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 WISP3O95389 354 aaPredicted RBP12.77□□□□□ -0.37
CHFR-216ENST00000538235 FTH1P02794 183 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 ESR1P03372 595 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 GP1BAP07359 652 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 BDKRB1P46663 353 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 GFERP55789 205 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 KIR2DS5Q14953 304 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 KBTBD12Q3ZCT8 623 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 DNTTIP2Q5QJE6 756 aaKnown RBP12.77□□□□□ -0.37
CHFR-216ENST00000538235 RNF187Q5TA31 235 aaPredicted RBP12.77□□□□□ -0.37
CHFR-216ENST00000538235 PTRHD1Q6GMV3 140 aaKnown RBP12.77□□□□□ -0.37
CHFR-216ENST00000538235 TMEM26Q6ZUK4 368 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 ZC3HC1Q86WB0 502 aaKnown RBP12.77□□□□□ -0.37
CHFR-216ENST00000538235 RELL1Q8IUW5 271 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 SCG3Q8WXD2 468 aaKnown RBP12.77□□□□□ -0.37
CHFR-216ENST00000538235 GLMNQ92990 594 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 NAT6Q93015 286 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 PPM1MQ96MI6 270 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 LRRN3Q9H3W5 708 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 PLAGL1Q9UM63 463 aa12.77□□□□□ -0.37
CHFR-216ENST00000538235 FER1L5A0AVI2 2057 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 FREM2Q5SZK8 3169 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 KNTC1P50748 2209 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 LILRA5A6NI73 299 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 LIN7AO14910 233 aaPredicted RBP12.76□□□□□ -0.37
CHFR-216ENST00000538235 KCNJ13O60928 360 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 SLCO2B1O94956 709 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 TSPAN12O95859 305 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 SLC35G4P0C7Q5 338 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 FDXRP22570 491 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 VSNL1P62760 191 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 HSPA14Q0VDF9 509 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 CAMK2BQ13554 666 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.76□□□□□ -0.37
CHFR-216ENST00000538235 GALNT7Q86SF2 657 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 SDCCAG8Q86SQ7 713 aaPredicted RBP12.76□□□□□ -0.37
CHFR-216ENST00000538235 LRRC6Q86X45 466 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 CEP97Q8IW35 865 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 SLITRK4Q8IW52 837 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 LMNTD2Q8IXW0 634 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 CPNE9Q8IYJ1 553 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 UHMK1Q8TAS1 419 aaKnown RBP12.76□□□□□ -0.37
CHFR-216ENST00000538235 HGH1Q9BTY7 390 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 SCNM1Q9BWG6 230 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 FUT8Q9BYC5 575 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 FOXP3Q9BZS1 431 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 TWSG1Q9GZX9 223 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 SEMA6CQ9H3T2 930 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 SYNDIG1Q9H7V2 258 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 PPANQ9NQ55 473 aaKnown RBP12.76□□□□□ -0.37
CHFR-216ENST00000538235 LATS2Q9NRM7 1088 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 POT1Q9NUX5 634 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 SLC24A2Q9UI40 661 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 ICKQ9UPZ9 632 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 APOBEC2Q9Y235 224 aaKnown RBP12.76□□□□□ -0.37
CHFR-216ENST00000538235 PCM1Q15154 2024 aa12.76□□□□□ -0.37
CHFR-216ENST00000538235 HEATR5BQ9P2D3 2071 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms