RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 KELP23276 732 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 CNTFP26441 200 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 LIMK2P53671 638 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 TMEM115Q12893 351 aaPredicted RBP12.1□□□□□ -0.47
SCARB1-204ENST00000535005 LSAMPQ13449 338 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 MAP7Q14244 749 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 NFATC4Q14934 902 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 LIN52Q52LA3 116 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 LYSMD4Q5XG99 296 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 DCP2Q8IU60 420 aaKnown RBP12.1□□□□□ -0.47
SCARB1-204ENST00000535005 ALDH16A1Q8IZ83 802 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 RFWD2Q8NHY2 731 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 MIPOL1Q8TD10 442 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 DCUN1D1Q96GG9 259 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 C7orf26Q96N11 449 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 SLC6A18Q96N87 628 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 BIRC8Q96P09 236 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 PRRX2Q99811 253 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 BOCQ9BWV1 1114 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 PCMTD2Q9NV79 361 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 SLC17A4Q9Y2C5 497 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 CA5BQ9Y2D0 317 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 GMEB1Q9Y692 573 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 A0A0G2JND7 137 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 H0Y8X5 98 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 QSOX1O00391 747 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 FCHO1O14526 889 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 ATP1B2P14415 290 aaPredicted RBP12.09□□□□□ -0.47
SCARB1-204ENST00000535005 PKMP14618 531 aaKnown RBP12.09□□□□□ -0.47
SCARB1-204ENST00000535005 ANPEPP15144 967 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CD9P21926 228 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 POLD2P49005 469 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 ACTR3P61158 418 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 SLC18A2Q05940 514 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CNPY1Q3B7I2 92 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 LGSNQ5TDP6 509 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 ZNF549Q6P9A3 640 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 MACC1Q6ZN28 852 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 Q6ZSR6 202 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CEP68Q76N32 757 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 RASGEF1AQ8N9B8 481 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 TCP10LQ8TDR4 215 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 MRRFQ96E11 262 aaKnown RBP12.09□□□□□ -0.47
SCARB1-204ENST00000535005 SCARF2Q96GP6 870 aaPredicted RBP12.09□□□□□ -0.47
SCARB1-204ENST00000535005 VPS39Q96JC1 886 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 ZNF514Q96K75 400 aaPredicted RBP12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CLPBQ9H078 707 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 WWP1Q9H0M0 922 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 RMI1Q9H9A7 625 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 TM9SF3Q9HD45 589 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 MKS1Q9NXB0 559 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CRYL1Q9Y2S2 319 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 SLCO1B1Q9Y6L6 691 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CACNA1HO95180 2353 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 A0A1W2PPM1 405 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CAPN14A8MX76 684 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 H3BMM5 538 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 TNFRSF10CO14798 259 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 SGTAO43765 313 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 KRT38O76015 456 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CDK14O94921 469 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CEACAM5P06731 702 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 F7P08709 466 aaPredicted RBP12.09□□□□□ -0.47
SCARB1-204ENST00000535005 MAOBP27338 520 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 HTR1BP28222 390 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CD38P28907 300 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 SERPINB3P29508 390 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 AKT1P31749 480 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 DPP6P42658 865 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 DHPSP49366 369 aaPredicted RBP12.09□□□□□ -0.47
SCARB1-204ENST00000535005 SIM2Q14190 667 aaPredicted RBP12.09□□□□□ -0.47
SCARB1-204ENST00000535005 TBC1D25Q3MII6 688 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 BCL7AQ4VC05 210 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 PEAR1Q5VY43 1037 aaPredicted RBP12.09□□□□□ -0.47
SCARB1-204ENST00000535005 RINLQ6ZS11 566 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 TRIM74Q86UV6 250 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 SCUBE1Q8IWY4 988 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 RGL4Q8IZJ4 473 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CLDN19Q8N6F1 224 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 OR13H1Q8NG92 308 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 JADE3Q92613 823 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 CCDC97Q96F63 343 aaPredicted RBP12.09□□□□□ -0.47
SCARB1-204ENST00000535005 KLHDC7BQ96G42 594 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 GPR22Q99680 433 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 AARSD1Q9BTE6 412 aaKnown RBP12.09□□□□□ -0.47
SCARB1-204ENST00000535005 OR2AG1Q9H205 316 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 KCNK13Q9HB14 408 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 AASDHPPTQ9NRN7 309 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 TAGLN3Q9UI15 199 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 GNPTGQ9UJJ9 305 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 DCTN4Q9UJW0 460 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 GPR34Q9UPC5 381 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 PRSS21Q9Y6M0 314 aa12.09□□□□□ -0.47
SCARB1-204ENST00000535005 GON4LQ3T8J9 2241 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 UBA6A0AVT1 1052 aaPredicted RBP12.08□□□□□ -0.48
SCARB1-204ENST00000535005 HMX2A2RU54 273 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 TMEM202A6NGA9 273 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 EIF4E1BA6NMX2 242 aaKnown RBP12.08□□□□□ -0.48
SCARB1-204ENST00000535005 PRR5-ARHGAP8B1AHC4 643 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 VILLO15195 856 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms