RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 GRAMD1AQ96CP6 724 aa20.33■□□□□ 0.85
CCS-207ENST00000531990 DPYSL5Q9BPU6 564 aa20.33■□□□□ 0.85
CCS-207ENST00000531990 WDR83Q9BRX9 315 aaKnown RBP20.33■□□□□ 0.85
CCS-207ENST00000531990 FAM129AQ9BZQ8 928 aa20.33■□□□□ 0.85
CCS-207ENST00000531990 MTRF1LQ9UGC7 380 aaKnown RBP20.33■□□□□ 0.85
CCS-207ENST00000531990 DMGDHQ9UI17 866 aaKnown RBP20.33■□□□□ 0.85
CCS-207ENST00000531990 MSRB2Q9Y3D2 182 aa20.33■□□□□ 0.85
CCS-207ENST00000531990 CFAP20Q9Y6A4 193 aaKnown RBP20.33■□□□□ 0.85
CCS-207ENST00000531990 KNTC1P50748 2209 aa20.33■□□□□ 0.84
CCS-207ENST00000531990 SLC5A10A0PJK1 596 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 IQCF5A8MTL0 148 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 TMX2-CTNND1H3BSU7 103 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 CHRM3P20309 590 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 CD1CP29017 333 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 PDHA2P29803 388 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 CCR7P32248 378 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 MAPK9P45984 424 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 CARSP49589 748 aaKnown RBP20.32■□□□□ 0.84
CCS-207ENST00000531990 CSE1LP55060 971 aaKnown RBP20.32■□□□□ 0.84
CCS-207ENST00000531990 HSPA14Q0VDF9 509 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 GPR18Q14330 331 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 FRG1Q14331 258 aaKnown RBP20.32■□□□□ 0.84
CCS-207ENST00000531990 ISXQ2M1V0 245 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 CTSL3PQ5NE16 218 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 ZDHHC24Q6UX98 284 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 CCNI2Q6ZMN8 369 aaPredicted RBP20.32■□□□□ 0.84
CCS-207ENST00000531990 KIAA0408Q6ZU52 694 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 CEP128Q6ZU80 1094 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 USP53Q70EK8 1073 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 OTOAQ7RTW8 1153 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 PDZD3Q86UT5 571 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 C2CD4AQ8NCU7 369 aaPredicted RBP20.32■□□□□ 0.84
CCS-207ENST00000531990 ZFPM2Q8WW38 1151 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 BIRC8Q96P09 236 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 ATXN7L1Q9ULK2 861 aaPredicted RBP20.32■□□□□ 0.84
CCS-207ENST00000531990 COMMD10Q9Y6G5 202 aa20.32■□□□□ 0.84
CCS-207ENST00000531990 ESPNB1AK53 854 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 AOAHP28039 575 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 MPP1Q00013 466 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 MGAT5Q09328 741 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 SQSTM1Q13501 440 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 PLCL1Q15111 1095 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 ZNF789Q5FWF6 425 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 NKAIN2Q5VXU1 208 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 TRMT10BQ6PF06 316 aaKnown RBP20.31■□□□□ 0.84
CCS-207ENST00000531990 NAPRTQ6XQN6 538 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 CNTN4Q8IWV2 1026 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 LKAAEAR1Q8TD35 194 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 TFGQ92734 400 aaPredicted RBP20.31■□□□□ 0.84
CCS-207ENST00000531990 TMEM74Q96NL1 305 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 FERD3LQ96RJ6 166 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 TBC1D10AQ9BXI6 508 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 RDH14Q9HBH5 336 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 ZFATQ9P243 1243 aa20.31■□□□□ 0.84
CCS-207ENST00000531990 CASC3O15234 703 aaKnown RBP20.3■□□□□ 0.84
CCS-207ENST00000531990 NIPSNAP2O75323 286 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 UBXN7O94888 489 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 AMD1P17707 334 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 LEPRP48357 1165 aaKnown RBP20.3■□□□□ 0.84
CCS-207ENST00000531990 INHBCP55103 352 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 PLEKHS1Q5SXH7 462 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 DUS1LQ6P1R4 473 aaKnown RBP20.3■□□□□ 0.84
CCS-207ENST00000531990 KLHL35Q6PF15 583 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 MARCH9Q86YJ5 346 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 SLC22A15Q8IZD6 547 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 IFT81Q8WYA0 676 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 STRADBQ9C0K7 418 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 MVB12BQ9H7P6 319 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 L2HGDHQ9H9P8 463 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 PLAC1Q9HBJ0 212 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 ZDHHC18Q9NUE0 388 aa20.3■□□□□ 0.84
CCS-207ENST00000531990 COL27A1Q8IZC6 1860 aaPredicted RBP20.3■□□□□ 0.84
CCS-207ENST00000531990 CEP295Q9C0D2 2601 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 PRAMEF33A0A0G2JMD5 474 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 GPC4O75487 556 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 HAUS5O94927 633 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 PROS1P07225 676 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 GSTA2P09210 222 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 MAGEA4P43358 317 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 TEDDM1Q5T9Z0 273 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 CNSTQ6PJW8 725 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 CAPN12Q6ZSI9 719 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 GALNT7Q86SF2 657 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 NCSTNQ92542 709 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 CDKL2Q92772 493 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 TSPYL1Q9H0U9 437 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 NSMCE4AQ9NXX6 385 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 MOCS1Q9NZB8 636 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 ASF1AQ9Y294 204 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 ENTPD2Q9Y5L3 495 aa20.29■□□□□ 0.84
CCS-207ENST00000531990 BHMG1C9JSJ3 638 aaPredicted RBP20.28■□□□□ 0.84
CCS-207ENST00000531990 SLCO2B1O94956 709 aa20.28■□□□□ 0.84
CCS-207ENST00000531990 F7P08709 466 aaPredicted RBP20.28■□□□□ 0.84
CCS-207ENST00000531990 CCKBRP32239 447 aa20.28■□□□□ 0.84
CCS-207ENST00000531990 TTLL9Q3SXZ7 439 aa20.28■□□□□ 0.84
CCS-207ENST00000531990 PHF19Q5T6S3 580 aa20.28■□□□□ 0.84
CCS-207ENST00000531990 TMEM71Q6P5X7 295 aa20.28■□□□□ 0.84
CCS-207ENST00000531990 WDR74Q6RFH5 385 aaPredicted RBP20.28■□□□□ 0.84
CCS-207ENST00000531990 PLXDC1Q8IUK5 500 aa20.28■□□□□ 0.84
CCS-207ENST00000531990 IFT20Q8IY31 132 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms