RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 GDF10P55107 478 aa22.57■■□□□ 1.2
PKP3-206ENST00000528036 POU6F1Q14863 301 aa22.57■■□□□ 1.2
PKP3-206ENST00000528036 OASLQ15646 514 aaKnown RBP22.57■■□□□ 1.2
PKP3-206ENST00000528036 SEC14L1Q92503 715 aa22.57■■□□□ 1.2
PKP3-206ENST00000528036 PEX13Q92968 403 aa22.57■■□□□ 1.2
PKP3-206ENST00000528036 MVB12BQ9H7P6 319 aa22.57■■□□□ 1.2
PKP3-206ENST00000528036 COG4Q9H9E3 785 aa22.57■■□□□ 1.2
PKP3-206ENST00000528036 SYTL2Q9HCH5 934 aa22.57■■□□□ 1.2
PKP3-206ENST00000528036 STARD5Q9NSY2 213 aa22.57■■□□□ 1.2
PKP3-206ENST00000528036 PADI1Q9ULC6 663 aa22.57■■□□□ 1.2
PKP3-206ENST00000528036 ZKSCAN5Q9Y2L8 839 aa22.57■■□□□ 1.2
PKP3-206ENST00000528036 ATMQ13315 3056 aa22.56■■□□□ 1.2
PKP3-206ENST00000528036 LOC101059948A0A1B0GTJ6 334 aa22.56■■□□□ 1.2
PKP3-206ENST00000528036 SPAG6O75602 509 aa22.56■■□□□ 1.2
PKP3-206ENST00000528036 SUN1O94901 812 aa22.56■■□□□ 1.2
PKP3-206ENST00000528036 TPH1P17752 444 aa22.56■■□□□ 1.2
PKP3-206ENST00000528036 SH3BP2P78314 561 aa22.56■■□□□ 1.2
PKP3-206ENST00000528036 TUBB3Q13509 450 aa22.56■■□□□ 1.2
PKP3-206ENST00000528036 CERS6Q6ZMG9 384 aa22.56■■□□□ 1.2
PKP3-206ENST00000528036 FAM96AQ9H5X1 160 aa22.56■■□□□ 1.2
PKP3-206ENST00000528036 PAK5Q9P286 719 aa22.56■■□□□ 1.2
PKP3-206ENST00000528036 CFAP20Q9Y6A4 193 aaKnown RBP22.56■■□□□ 1.2
PKP3-206ENST00000528036 IGHV5-51A0A0C4DH38 117 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 TCRBV7S2A1N4TA0A589 114 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 AP3B1O00203 1094 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 LIN7AO14910 233 aaPredicted RBP22.55■■□□□ 1.2
PKP3-206ENST00000528036 KIAA0754O94854 1291 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 FTH1P02794 183 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 TCN2P20062 427 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 CYP4F2P78329 520 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 PACS1Q6VY07 963 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 PPP1R21Q6ZMI0 780 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 D2HGDHQ8N465 521 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 CCDC89Q8N998 374 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 RMDN2Q96LZ7 410 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 RANBP9Q96S59 729 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 MAP3K3Q99759 626 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 SLC25A18Q9H1K4 315 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 LNPEPQ9UIQ6 1025 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 ZNF106Q9H2Y7 1883 aaKnown RBP22.55■■□□□ 1.2
PKP3-206ENST00000528036 ZNF462Q96JM2 2506 aa22.55■■□□□ 1.2
PKP3-206ENST00000528036 A0A0U1RQJ8 604 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 OR6C74A6NCV1 312 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 C21orf140B9A014 251 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 IFNB1P01574 187 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 CCDC175P0C221 793 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 FAM87AP0C7U9 286 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 ADRA1DP25100 572 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 MSNP26038 577 aaKnown RBP22.54■■□□□ 1.2
PKP3-206ENST00000528036 TUBB4BP68371 445 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 CDC20Q12834 499 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 TUBB2AQ13885 445 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 MEI1Q5TIA1 1274 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 DRICH1Q6PGQ1 229 aaPredicted RBP22.54■■□□□ 1.2
PKP3-206ENST00000528036 SPDYE1Q8NFV5 336 aaPredicted RBP22.54■■□□□ 1.2
PKP3-206ENST00000528036 LCN9Q8WX39 176 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 STARD8Q92502 1023 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 FERD3LQ96RJ6 166 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 TUBB2BQ9BVA1 445 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 OR52A5Q9H2C5 316 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 SRMSQ9H3Y6 488 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 TFB2MQ9H5Q4 396 aaKnown RBP22.54■■□□□ 1.2
PKP3-206ENST00000528036 FANCEQ9HB96 536 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 ETNK1Q9HBU6 452 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 C1GALT1Q9NS00 363 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 FGF21Q9NSA1 209 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 FAM8A1Q9UBU6 413 aa22.54■■□□□ 1.2
PKP3-206ENST00000528036 KDM1AO60341 852 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 DLSTP36957 453 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 NFATC3Q12968 1075 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 SEMA5AQ13591 1074 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 CCNG2Q16589 344 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 GALNT6Q8NCL4 622 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 OR52K1Q8NGK4 314 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 APOBEC4Q8WW27 367 aaKnown RBP22.53■■□□□ 1.2
PKP3-206ENST00000528036 ATG4AQ8WYN0 398 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 SGSM3Q96HU1 749 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 LATS2Q9NRM7 1088 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 HOMER3Q9NSC5 361 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 SMARCAL1Q9NZC9 954 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 DRG1Q9Y295 367 aaKnown RBP22.53■■□□□ 1.2
PKP3-206ENST00000528036 BTRCQ9Y297 605 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 PCDHGA6Q9Y5G7 932 aa22.53■■□□□ 1.2
PKP3-206ENST00000528036 CFAP46Q8IYW2 2715 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 PIEZO2Q9H5I5 2752 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 HELZ2Q9BYK8 2649 aaKnown RBP22.52■■□□□ 1.2
PKP3-206ENST00000528036 CCL22O00626 93 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 OR56A5P0C7T3 313 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 ITGB6P18564 788 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 DBN1Q16643 649 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 ZNF658BQ4V348 819 aaPredicted RBP22.52■■□□□ 1.2
PKP3-206ENST00000528036 AFTPHQ6ULP2 937 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 TRIM58Q8NG06 486 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 OR4E2Q8NGC2 313 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 TFGQ92734 400 aaPredicted RBP22.52■■□□□ 1.2
PKP3-206ENST00000528036 TSSK1BQ9BXA7 367 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 GPR87Q9BY21 358 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 RAB6BQ9NRW1 208 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 KCND1Q9NSA2 647 aa22.52■■□□□ 1.2
PKP3-206ENST00000528036 POLG2Q9UHN1 485 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms