RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ZDHHC18Q9NUE0 388 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 HACD3Q9P035 362 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 SLC2A6Q9UGQ3 507 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 ASIC3Q9UHC3 531 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 PCDHB3Q9Y5E6 796 aa10.74□□□□□ -0.69
NEDD8-204ENST00000526430 RGSL1A5PLK6 1076 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 GOLGA6CA6NDK9 693 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 GOLGA6BA6NDN3 693 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 E7EVH7 732 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 GPR39O43194 453 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 GOLGA6DP0CG33 693 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 THRAP10827 490 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 LPOP22079 712 aaPredicted RBP10.73□□□□□ -0.69
NEDD8-204ENST00000526430 ADRA1DP25100 572 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 MGAT1P26572 445 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 ARNTP27540 789 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 NMBRP28336 390 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 ECHS1P30084 290 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 GPR3P46089 330 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 SESN2P58004 480 aaPredicted RBP10.73□□□□□ -0.69
NEDD8-204ENST00000526430 DCDC1P59894 354 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 MAP7Q14244 749 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 POU6F1Q14863 301 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 TCEA2Q15560 299 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 INPP5JQ15735 1006 aaPredicted RBP10.73□□□□□ -0.69
NEDD8-204ENST00000526430 KHDC1Q4VXA5 237 aaKnown RBP10.73□□□□□ -0.69
NEDD8-204ENST00000526430 GLT6D1Q7Z4J2 308 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 HOOK3Q86VS8 718 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 UNC5BQ8IZJ1 945 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 CEP112Q8N8E3 955 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 FAM46DQ8NEK8 389 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 CCHCR1Q8TD31 782 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 NUS1Q96E22 293 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 SNF8Q96H20 258 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 CDKN2AIPNLQ96HQ2 116 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 COX14Q96I36 57 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 SRPK1Q96SB4 655 aaKnown RBP10.73□□□□□ -0.69
NEDD8-204ENST00000526430 APOOQ9BUR5 198 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 KIFC1Q9BW19 673 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 TEX101Q9BY14 249 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 GPR63Q9BZJ6 419 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 DPH5Q9H2P9 285 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 FAM83DQ9H4H8 585 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 SUDS3Q9H7L9 328 aaPredicted RBP10.73□□□□□ -0.69
NEDD8-204ENST00000526430 NLE1Q9NVX2 485 aaPredicted RBP10.73□□□□□ -0.69
NEDD8-204ENST00000526430 SYBUQ9NX95 663 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 GOLGA6AQ9NYA3 693 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.73□□□□□ -0.69
NEDD8-204ENST00000526430 WHRNQ9P202 907 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 KLQ9UEF7 1012 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 RIMKLBQ9ULI2 386 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 TCAF1Q9Y4C2 921 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 PCYT1BQ9Y5K3 369 aaPredicted RBP10.73□□□□□ -0.69
NEDD8-204ENST00000526430 FER1L5A0AVI2 2057 aa10.73□□□□□ -0.69
NEDD8-204ENST00000526430 ESYT3A0FGR9 886 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 HEATR9A2RTY3 570 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 B4DGG1 531 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 E7ESA3 106 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 H7C0S8 307 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 UGT1A9O60656 530 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 RECKO95980 971 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 TNFP01375 233 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 HOXC4P09017 264 aaPredicted RBP10.72□□□□□ -0.69
NEDD8-204ENST00000526430 PRSS56P0CW18 603 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 UGT1A6P19224 532 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 UGT1A1P22309 533 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 UGT1A4P22310 534 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 TEAD1P28347 426 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 CD1CP29017 333 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 CDKN1CP49918 316 aaPredicted RBP10.72□□□□□ -0.69
NEDD8-204ENST00000526430 OR1D5P58170 312 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 MORF4L2Q15014 288 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 CHRNA6Q15825 494 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 AMZ1Q400G9 498 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 NADK2Q4G0N4 442 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 PCID2Q5JVF3 399 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 TSTD2Q5T7W7 516 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 ENPP7Q6UWV6 458 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 CES3Q6UWW8 571 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 PPP1R21Q6ZMI0 780 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 RD3Q7Z3Z2 195 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 TAF8Q7Z7C8 310 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 SFTPA2Q8IWL1 248 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 PAF1Q8N7H5 531 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 MNS1Q8NEH6 495 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 AP2M1Q96CW1 435 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 PDXPQ96GD0 296 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 DNAJC1Q96KC8 554 aaKnown RBP10.72□□□□□ -0.69
NEDD8-204ENST00000526430 WDR92Q96MX6 357 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 UNKQ9C0B0 810 aaKnown RBP10.72□□□□□ -0.69
NEDD8-204ENST00000526430 UGT1A7Q9HAW7 530 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 UGT1A10Q9HAW8 530 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 UGT1A8Q9HAW9 530 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 MLXIPLQ9NP71 852 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 OCIAD1Q9NX40 245 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 FKBPLQ9UIM3 349 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 OR1A2Q9Y585 309 aa10.72□□□□□ -0.69
NEDD8-204ENST00000526430 PCDHGA9Q9Y5G4 932 aaKnown RBP10.72□□□□□ -0.69
NEDD8-204ENST00000526430 OAS3Q9Y6K5 1087 aaKnown RBP10.72□□□□□ -0.69
NEDD8-204ENST00000526430 DNHD1Q96M86 4753 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms