RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	NEUROG3	Q9Y4Z2	214 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	PCDHGA10	Q9Y5H3	936 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	PMF1-BGLAP	U3KQ54	211 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	TAF4	O00268	1085 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	LSM1	O15116	133 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	NUAK1	O60285	661 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	VPS26A	O75436	327 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	NDUFS3	O75489	264 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	UPK1B	O75841	260 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	F2	P00734	622 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	HAPLN1	P10915	354 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	IGFBP5	P24593	272 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	PSMB9	P28065	219 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	FMO4	P31512	558 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	RPL9	P32969	192 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	NRIP1	P48552	1158 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	ALDH7A1	P49419	539 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	TUBA1B	P68363	451 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	FADD	Q13158	208 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	LAPTM5	Q13571	262 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	RAPSN	Q13702	412 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	KEAP1	Q14145	624 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	IHH	Q14623	411 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	MAPK11	Q15759	364 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	PLEKHG6	Q3KR16	790 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	AFTPH	Q6ULP2	937 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	IL27RA	Q6UWB1	636 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	TUBA1A	Q71U36	451 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	GPR149	Q86SP6	731 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	NAT16	Q8N8M0	369 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	GLB1L3	Q8NCI6	653 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	SCAMP5	Q8TAC9	235 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	CNIH3	Q8TBE1	160 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	PSMG2	Q969U7	264 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	GPR21	Q99679	349 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	KAT8	Q9H7Z6	458 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	DCAF13	Q9NV06	445 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	CD274	Q9NZQ7	290 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	CACNG4	Q9UBN1	327 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	EIF2B4	Q9UI10	523 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	TMEFF2	Q9UIK5	374 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	MED16	Q9Y2X0	877 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	CLDN24	A6NM45	220 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ENPP3	O14638	875 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PRMT5	O14744	637 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	DFNA5	O60443	496 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	SNAI1	O95863	264 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	CD9	P21926	228 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ARL1	P40616	181 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	DGKQ	P52824	942 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	LSM3	P62310	102 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PHC1	P78364	1004 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	IL10RB	Q08334	325 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	MAD2L1	Q13257	205 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	KRR1	Q13601	381 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	MAPKAPK3	Q16644	382 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PIK3R6	Q5UE93	754 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	TMEM236	Q5W0B7	351 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	CAPN13	Q6MZZ7	669 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	B3GNT8	Q7Z7M8	397 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	MICU2	Q8IYU8	434 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	DNAJB8	Q8NHS0	232 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PSMA8	Q8TAA3	256 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	METTL6	Q8TCB7	284 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	NCLN	Q969V3	563 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	RHBDF1	Q96CC6	855 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	CDKN2AIPNL	Q96HQ2	116 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PPP3R2	Q96LZ3	170 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	YME1L1	Q96TA2	773 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	SEMA3C	Q99985	751 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	APOL4	Q9BPW4	351 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	EHD1	Q9H4M9	534 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	TRMT6	Q9UJA5	497 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	OSGIN1	Q9UJX0	560 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	IKZF3	Q9UKT9	509 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	TLR6	Q9Y2C9	796 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	TESMIN	Q9Y4I5	508 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	POLR3H	Q9Y535	204 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	MRPL42	Q9Y6G3	142 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PTPRD	P23468	1912 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	RGS10	O43665	173 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ASNA1	O43681	348 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	MAN1A2	O60476	641 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	FTH1	P02794	183 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ALDH4A1	P30038	563 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	IL2	P60568	153 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PTPRCAP	Q14761	206 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	SMU1	Q2TAY7	513 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	AP5B1	Q2VPB7	878 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	SETMAR	Q53H47	684 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ATAD3B	Q5T9A4	648 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	SHQ1	Q6PI26	577 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PAGE2	Q7Z2X7	111 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	KIAA1958	Q8N8K9	716 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	C3orf58	Q8NDZ4	430 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	MCFD2	Q8NI22	146 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	FRS2	Q8WU20	508 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	GTF2H4	Q92759	462 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms