RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 BSNQ9UPA5 3926 aa16.63■□□□□ 0.25
SQLE-205ENST00000521232 CCDC78A2IDD5 438 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 CCDC162PA2VCL2 907 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 FGGP02679 453 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 FGF5P12034 268 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 FOXN2P32314 431 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 CYP4F2P78329 520 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 ACVR1Q04771 509 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 TSTD2Q5T7W7 516 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 PACS1Q6VY07 963 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 NLRP9Q7RTR0 991 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 OOSP2Q86WS3 158 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 KMT5CQ86Y97 462 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 PEX13Q92968 403 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 HDAC10Q969S8 669 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 MED8Q96G25 268 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 SGSM3Q96HU1 749 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 MAP3K3Q99759 626 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 SMARCAL1Q9NZC9 954 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 PPP2R2CQ9Y2T4 447 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 PRSS21Q9Y6M0 314 aa16.62■□□□□ 0.25
SQLE-205ENST00000521232 TLN1Q9Y490 2541 aaKnown RBP16.61■□□□□ 0.25
SQLE-205ENST00000521232 LOC101059948A0A1B0GTJ6 334 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 GOLGA6L3A6NEY3 463 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 OR51F1A6NGY5 319 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 QSOX1O00391 747 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 NRDCO43847 1150 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 APRTP07741 180 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 PDHA2P29803 388 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 KRT33BQ14525 404 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 DNTTIP2Q5QJE6 756 aaKnown RBP16.61■□□□□ 0.25
SQLE-205ENST00000521232 LYPLAL1Q5VWZ2 237 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 CYB5D1Q6P9G0 228 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 ZNF449Q6P9G9 518 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 CARFQ8N187 725 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 ESX1Q8N693 406 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 EXD3Q8N9H8 876 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 ACVR1CQ8NER5 493 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 EXTL1Q92935 676 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 SLC45A3Q96JT2 553 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 ZNF778Q96MU6 729 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 FERD3LQ96RJ6 166 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 EFHD1Q9BUP0 239 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 ULBP3Q9BZM4 244 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 EIF2B3Q9NR50 452 aaKnown RBP16.61■□□□□ 0.25
SQLE-205ENST00000521232 HOMER3Q9NSC5 361 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 SLC2A6Q9UGQ3 507 aa16.61■□□□□ 0.25
SQLE-205ENST00000521232 UBA6A0AVT1 1052 aaPredicted RBP16.6■□□□□ 0.25
SQLE-205ENST00000521232 OR6C74A6NCV1 312 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 TLCD2A6NGC4 264 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 IFRD1O00458 451 aaPredicted RBP16.6■□□□□ 0.25
SQLE-205ENST00000521232 CEP104O60308 925 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 SPAG6O75602 509 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 GOT2P00505 430 aaKnown RBP16.6■□□□□ 0.25
SQLE-205ENST00000521232 ZNF28P17035 718 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 TBR1Q16650 682 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.6■□□□□ 0.25
SQLE-205ENST00000521232 AFTPHQ6ULP2 937 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 CERS6Q6ZMG9 384 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 BPHLQ86WA6 291 aaPredicted RBP16.6■□□□□ 0.25
SQLE-205ENST00000521232 PPP1R3BQ86XI6 285 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 D2HGDHQ8N465 521 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 SIDT2Q8NBJ9 832 aaKnown RBP16.6■□□□□ 0.25
SQLE-205ENST00000521232 OR4E2Q8NGC2 313 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 OR4L1Q8NH43 312 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 KIAA1143Q96AT1 154 aaPredicted RBP16.6■□□□□ 0.25
SQLE-205ENST00000521232 FCRL4Q96PJ5 515 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 TFB2MQ9H5Q4 396 aaKnown RBP16.6■□□□□ 0.25
SQLE-205ENST00000521232 MVB12BQ9H7P6 319 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 GPN2Q9H9Y4 310 aaPredicted RBP16.6■□□□□ 0.25
SQLE-205ENST00000521232 TCAF1Q9Y4C2 921 aa16.6■□□□□ 0.25
SQLE-205ENST00000521232 LIN7AO14910 233 aaPredicted RBP16.59■□□□□ 0.25
SQLE-205ENST00000521232 FTH1P02794 183 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 FOLR1P15328 257 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 CXCR5P32302 372 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 STAT5AP42229 794 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 KCNJ1P48048 391 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 PREPP48147 710 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 ACY1Q03154 408 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 BOP1Q14137 746 aaKnown RBP16.59■□□□□ 0.25
SQLE-205ENST00000521232 PCID2Q5JVF3 399 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 ARMC6Q6NXE6 501 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 C6orf15Q6UXA7 325 aaPredicted RBP16.59■□□□□ 0.25
SQLE-205ENST00000521232 ZNF534Q76KX8 674 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 GSTA5Q7RTV2 222 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 RASGRP3Q8IV61 690 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 UNC5BQ8IZJ1 945 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 PHC3Q8NDX5 983 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 TFGQ92734 400 aaPredicted RBP16.59■□□□□ 0.25
SQLE-205ENST00000521232 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.59■□□□□ 0.25
SQLE-205ENST00000521232 TTC1Q99614 292 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 PDE7BQ9NP56 450 aa16.59■□□□□ 0.25
SQLE-205ENST00000521232 ZNF891A8MT65 544 aaPredicted RBP16.58■□□□□ 0.24
SQLE-205ENST00000521232 AP3B1O00203 1094 aa16.58■□□□□ 0.24
SQLE-205ENST00000521232 MATN2O00339 956 aa16.58■□□□□ 0.24
SQLE-205ENST00000521232 KIAA0754O94854 1291 aa16.58■□□□□ 0.24
SQLE-205ENST00000521232 ZBTB11O95625 1053 aaPredicted RBP16.58■□□□□ 0.24
SQLE-205ENST00000521232 OR56A5P0C7T3 313 aa16.58■□□□□ 0.24
SQLE-205ENST00000521232 POLR2CP19387 275 aaPredicted RBP16.58■□□□□ 0.24
SQLE-205ENST00000521232 NPY2RP49146 381 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms