RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 NHLRC2Q8NBF2 726 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 C16orf52Q8NHV5 167 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 ZNF671Q8TAW3 534 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 WIPF2Q8TF74 440 aaPredicted RBP5.86□□□□□ -1.47
SQLE-203ENST00000518931 CDKL2Q92772 493 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 PEX13Q92968 403 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 TMEM186Q96B77 213 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 COQ8BQ96D53 544 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 MRPL38Q96DV4 380 aaKnown RBP5.86□□□□□ -1.47
SQLE-203ENST00000518931 PHF21BQ96EK2 531 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 IFT74Q96LB3 600 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 PPP1R10Q96QC0 940 aaKnown RBP5.86□□□□□ -1.47
SQLE-203ENST00000518931 CD180Q99467 661 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 MTG1Q9BT17 334 aaPredicted RBP5.86□□□□□ -1.47
SQLE-203ENST00000518931 OSGEPL1Q9H4B0 414 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 FBRSL1Q9HCM7 1045 aaKnown RBP5.86□□□□□ -1.47
SQLE-203ENST00000518931 AGPAT5Q9NUQ2 364 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 ALKBH4Q9NXW9 302 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 HDAC6Q9UBN7 1215 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 FBXW2Q9UKT8 454 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 C15orf41Q9Y2V0 281 aa5.86□□□□□ -1.47
SQLE-203ENST00000518931 STRAPQ9Y3F4 350 aaKnown RBP5.86□□□□□ -1.47
SQLE-203ENST00000518931 FAM230AA0A1W2PPH8 454 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 SMIM30A4D0T7 59 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 SH2D7A6NKC9 451 aaPredicted RBP5.85□□□□□ -1.47
SQLE-203ENST00000518931 A6NL46 340 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 RSPH10B2B2RC85 870 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 HSBP1L1C9JCN9 74 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 FRAT2O75474 233 aaPredicted RBP5.85□□□□□ -1.47
SQLE-203ENST00000518931 TADA2AO75478 443 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 RHOBTB1O94844 696 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 FGBP02675 491 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 CSF2P04141 144 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 GALTP07902 379 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 RSPH10BP0C881 870 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 COX7A2P14406 83 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 NR2F2P24468 414 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 ACAT1P24752 427 aaKnown RBP5.85□□□□□ -1.47
SQLE-203ENST00000518931 PTBP1P26599 531 aaKnown RBP eCLIP5.85□□□□□ -1.47
SQLE-203ENST00000518931 CSTF2P33240 577 aaKnown RBP eCLIP5.85□□□□□ -1.47
SQLE-203ENST00000518931 TTKP33981 857 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 PBX3P40426 434 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 OR1G1P47890 313 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 ST8SIA6P61647 398 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 GFPT1Q06210 699 aaPredicted RBP5.85□□□□□ -1.47
SQLE-203ENST00000518931 CUL1Q13616 776 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 KCNC3Q14003 757 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 LETM2Q2VYF4 491 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 MDH1BQ5I0G3 518 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 ERICH5Q6P6B1 374 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 C6orf89Q6UWU4 347 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 C15orf39Q6ZRI6 1047 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 HAUS6Q7Z4H7 955 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 SYVN1Q86TM6 617 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 ARHGAP12Q8IWW6 846 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 TMEM116Q8NCL8 245 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 AGBL3Q8NEM8 1001 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 OR52N4Q8NGI2 321 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 ARHGAP45Q92619 1136 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 ELP4Q96EB1 424 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 MSANTD3Q96H12 275 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 SAMD8Q96LT4 415 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 TTC25Q96NG3 672 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 EGFL8Q99944 293 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 SEMA3CQ99985 751 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 C1QTNF7Q9BXJ2 289 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 MOV10L1Q9BXT6 1211 aaKnown RBP5.85□□□□□ -1.47
SQLE-203ENST00000518931 KRTAP17-1Q9BYP8 105 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 TMEM206Q9H813 350 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 KCNK13Q9HB14 408 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 SMPD3Q9NY59 655 aaPredicted RBP5.85□□□□□ -1.47
SQLE-203ENST00000518931 RCE1Q9Y256 329 aa5.85□□□□□ -1.47
SQLE-203ENST00000518931 BAZ1BQ9UIG0 1483 aaKnown RBP5.84□□□□□ -1.47
SQLE-203ENST00000518931 ZMYM2Q9UBW7 1377 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 C15orf38-AP3S2A0A0A6YYH1 394 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 OR6C74A6NCV1 312 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 ZSCAN5BA6NJL1 495 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 FOXO6A8MYZ6 492 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.84□□□□□ -1.47
SQLE-203ENST00000518931 MEIS2O14770 477 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 YKT6O15498 198 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 SSX5O60225 188 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 NFATC1O95644 943 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 PTBP3O95758 552 aaKnown RBP5.84□□□□□ -1.47
SQLE-203ENST00000518931 PCCBP05166 539 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 IVLP07476 585 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 ZFYP08048 801 aaPredicted RBP5.84□□□□□ -1.47
SQLE-203ENST00000518931 HSPA8P11142 646 aaKnown RBP5.84□□□□□ -1.47
SQLE-203ENST00000518931 EPORP19235 508 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 HNRNPA2B1P22626 353 aaKnown RBP5.84□□□□□ -1.47
SQLE-203ENST00000518931 SFNP31947 248 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 TAGLN2P37802 199 aaKnown RBP5.84□□□□□ -1.47
SQLE-203ENST00000518931 CLCNKAP51800 687 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 ATP5IP56385 69 aaPredicted RBP5.84□□□□□ -1.47
SQLE-203ENST00000518931 UFM1P61960 85 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 IRX1P78414 480 aaPredicted RBP5.84□□□□□ -1.47
SQLE-203ENST00000518931 HSPA14Q0VDF9 509 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 OVGP1Q12889 678 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 IL11RAQ14626 422 aa5.84□□□□□ -1.47
SQLE-203ENST00000518931 RRS1Q15050 365 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms