RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 TMEM211Q6ICI0 200 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 FAM198BQ6UWH4 519 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 GDPD4Q6W3E5 623 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 ZNF852Q6ZMS4 543 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 PIWIL4Q7Z3Z4 852 aaKnown RBP2.88□□□□□ -1.95
SKP1-203ENST00000517625 DSG4Q86SJ6 1040 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 TC2NQ8N9U0 490 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 LMNTD1Q8N9Z9 388 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 TDRD5Q8NAT2 981 aaKnown RBP2.88□□□□□ -1.95
SKP1-203ENST00000517625 XXYLT1Q8NBI6 393 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 CCDC191Q8NCU4 936 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 DMBX1Q8NFW5 382 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 CFAP61Q8NHU2 1237 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 SLAMF9Q96A28 289 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 PGAP3Q96FM1 320 aaPredicted RBP2.88□□□□□ -1.95
SKP1-203ENST00000517625 OXNAD1Q96HP4 312 aaPredicted RBP2.88□□□□□ -1.95
SKP1-203ENST00000517625 PRMT6Q96LA8 375 aaPredicted RBP2.88□□□□□ -1.95
SKP1-203ENST00000517625 FAM81BQ96LP2 452 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 C17orf77Q96MU5 243 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 ZNF583Q96ND8 569 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 BAG1Q99933 345 aaPredicted RBP2.88□□□□□ -1.95
SKP1-203ENST00000517625 LMF2Q9BU23 707 aaKnown RBP2.88□□□□□ -1.95
SKP1-203ENST00000517625 SLA2Q9H6Q3 261 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 ERVMER34-1Q9H9K5 563 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 APOBEC3GQ9HC16 384 aaKnown RBP2.88□□□□□ -1.95
SKP1-203ENST00000517625 DPP3Q9NY33 737 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 ZNF711Q9Y462 761 aa2.88□□□□□ -1.95
SKP1-203ENST00000517625 PRSS51A0A1B0GVH4 220 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 ANKUB1A6NFN9 424 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 C5orf60A6NFR6 353 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 HEPACAM2A8MVW5 462 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 A8MXE2 369 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 BMPR1BO00238 502 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 FGF17O60258 216 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 ZWINTO95229 277 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 TRUB2O95900 331 aaKnown RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 BCL10O95999 233 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 ATP1A1P05023 1023 aaKnown RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 OR2T7P0C7T2 308 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 EEF1B2P24534 225 aaKnown RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 RAB28P51157 221 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 PNRC1Q12796 327 aaPredicted RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 DMP1Q13316 513 aaPredicted RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 PTPRCAPQ14761 206 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 FAM133BQ5BKY9 247 aaKnown RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 RUSC1-AS1Q66K80 236 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 RPUSD3Q6P087 351 aaKnown RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 TEX38Q6PEX7 206 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 FIGLAQ6QHK4 219 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 RBPMS2Q6ZRY4 209 aaKnown RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 CHST3Q7LGC8 479 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 CCDC186Q7Z3E2 898 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 CAMKMTQ7Z624 323 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 SLC9B2Q86UD5 537 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 FBXO39Q8N4B4 442 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 CPSF7Q8N684 471 aaKnown RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 KCTD6Q8NC69 237 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 RBM15BQ8NDT2 890 aaKnown RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 OR13A1Q8NGR1 328 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 CCDC107Q8WV48 283 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 SEMA4DQ92854 862 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 HDAC11Q96DB2 347 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 CNDP2Q96KP4 475 aaKnown RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 ZNF830Q96NB3 372 aaPredicted RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 ZNF582Q96NG8 517 aaPredicted RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 LRRC3BQ96PB8 259 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 UHRF2Q96PU4 802 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 C16orf70Q9BSU1 422 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 ABHD6Q9BV23 337 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 MMP28Q9H239 520 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 DPAGT1Q9H3H5 408 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 NOL11Q9H8H0 719 aaKnown RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 TRPC7Q9HCX4 862 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 OLFML3Q9NRN5 406 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 SPHK1Q9NYA1 384 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 NPAP1Q9NZP6 1156 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 BCCIPQ9P287 314 aaKnown RBP eCLIP2.87□□□□□ -1.95
SKP1-203ENST00000517625 NFKBIL1Q9UBC1 381 aaPredicted RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 NRBP1Q9UHY1 535 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 CCL27Q9Y4X3 112 aa2.87□□□□□ -1.95
SKP1-203ENST00000517625 SPIN1Q9Y657 262 aaPredicted RBP2.87□□□□□ -1.95
SKP1-203ENST00000517625 TEX13DA0A0J9YY54 714 aaPredicted RBP2.86□□□□□ -1.95
SKP1-203ENST00000517625 EDDM13A0A1B0GTR0 161 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 A0A1W2PN81 502 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 FAM72CH0Y354 149 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 CCDC188H7C350 402 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 P2RY10O00398 339 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 TCERG1O14776 1098 aaKnown RBP2.86□□□□□ -1.95
SKP1-203ENST00000517625 OR10H2O60403 315 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 GCNT3O95395 438 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 C22orf31O95567 290 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 CRYAAP02489 173 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 FYNP06241 537 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 CCDC175P0C221 793 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 PCGF2P35227 344 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 CHRNA7P36544 502 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 LIMK1P53667 647 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 RAD23AP54725 363 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 CCDC6Q16204 474 aa2.86□□□□□ -1.95
SKP1-203ENST00000517625 STXBP5Q5T5C0 1151 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms