RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 MED22Q15528 200 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 PHKG1Q16816 387 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 CYBRD1Q53TN4 286 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 DUS1LQ6P1R4 473 aaKnown RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SLC44A2Q8IWA5 706 aaPredicted RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ZZZ3Q8IYH5 903 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 DCBLD1Q8N8Z6 715 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 OR13J1Q8NGT2 312 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 HMCESQ96FZ2 354 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF641Q96N77 438 aaPredicted RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF599Q96NL3 588 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 CHCHD6Q9BRQ6 235 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 TMEM245Q9H330 911 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SP140LQ9H930 580 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ATP13A1Q9HD20 1204 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 NMRK2Q9NPI5 230 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 CCDC177Q9NQR7 707 aaPredicted RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF490Q9ULM2 529 aaPredicted RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 PCDHB1Q9Y5F3 818 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 PCDHGB5Q9Y5G0 923 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 HSPE1-MOB4S4R3N1 261 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 FAM220BPB1ANY3 271 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SCAMP3O14828 347 aaKnown RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 AQP9O43315 295 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 DYRK3O43781 588 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 RFPL2O75678 378 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SOAT1P35610 550 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 CHI3L1P36222 383 aaPredicted RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 EMP3P54852 163 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SH3BP2P78314 561 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SCN1BQ07699 218 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 IL10RBQ08334 325 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 TP53BP2Q13625 1128 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 TMEM236Q5W0B7 351 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 RRM2BQ7LG56 351 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 OSTM1Q86WC4 334 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 GATAD2AQ86YP4 633 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 LGI2Q8N0V4 545 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ELMOD1Q8N336 334 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 LIX1Q8N485 282 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 NPWQ8N729 165 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SUN5Q8TC36 379 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 HASPINQ8TF76 798 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 MTFMTQ96DP5 389 aaKnown RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ALPK1Q96QP1 1244 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 IL12RB2Q99665 862 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 MROQ9BYG7 248 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 TRIM8Q9BZR9 551 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 PAK1IP1Q9NWT1 392 aaPredicted RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 MARCH2Q9P0N8 246 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 KIAA1522Q9P206 1035 aaPredicted RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ANKMY1Q9P2S6 941 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 CFL2Q9Y281 166 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 A0A1B0GTW7 788 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 FAM172BPA6NC97 362 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 KRT87PA6NCN2 255 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 NOTOA8MTQ0 251 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 TSPAN3O60637 253 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 TMCC2O75069 709 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 CREG1O75629 220 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SEC14L2O76054 403 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 CRHBPP24387 322 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 EDNRBP24530 442 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 DGKQP52824 942 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 RHOAP61586 193 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 PIGFQ07326 219 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 LAPTM5Q13571 262 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 C21orf62-AS1Q17RA5 79 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SIRPB2Q5JXA9 342 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 C6orf136Q5SQH8 315 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 OR2T5Q6IEZ7 315 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 LINC00299Q6ZSB3 139 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ISCA2Q86U28 154 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 MON1AQ86VX9 555 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 NAT16Q8N8M0 369 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 OR2T29Q8NH02 315 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 PYURFQ96I23 114 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 MRGPRX2Q96LB1 330 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 FOPNLQ96NB1 174 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 CDK5RAP1Q96SZ6 601 aaKnown RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 OR2B2Q9GZK3 357 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ARL15Q9NXU5 204 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SPASTQ9UBP0 616 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 PCDHB5Q9Y5E4 795 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 F8W810 466 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 S1PR4O95977 384 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 PRPS2P11908 318 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 KCNE1P15382 129 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 GGT1P19440 569 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 FPR1P21462 350 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 KIR3DL1P43629 444 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 PPP3CCP48454 512 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 PSEN2P49810 448 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SCNN1GP51170 649 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 RAB25P57735 213 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 NFKB2Q00653 900 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ACSM2AQ08AH3 577 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SYT16Q17RD7 645 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SPDYE7PQ495Y7 208 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SYTL3Q4VX76 610 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 295 ms