RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 CHSY3Q70JA7 882 aa12.59□□□□□ -0.39
PVT1-203ENST00000513868 TMPRSS6Q8IU80 811 aa12.59□□□□□ -0.39
PVT1-203ENST00000513868 ZNF547Q8IVP9 402 aa12.59□□□□□ -0.39
PVT1-203ENST00000513868 CPSF7Q8N684 471 aaKnown RBP12.59□□□□□ -0.39
PVT1-203ENST00000513868 ACTRT2Q8TDY3 377 aa12.59□□□□□ -0.39
PVT1-203ENST00000513868 UBTD2Q8WUN7 234 aa12.59□□□□□ -0.39
PVT1-203ENST00000513868 UTP4Q969X6 686 aaKnown RBP12.59□□□□□ -0.39
PVT1-203ENST00000513868 LENG8Q96PV6 779 aaPredicted RBP12.59□□□□□ -0.39
PVT1-203ENST00000513868 OR2AG1Q9H205 316 aa12.59□□□□□ -0.39
PVT1-203ENST00000513868 TUBB1Q9H4B7 451 aa12.59□□□□□ -0.39
PVT1-203ENST00000513868 FBRSQ9HAH7 460 aa12.59□□□□□ -0.39
PVT1-203ENST00000513868 FBXL12Q9NXK8 326 aa12.59□□□□□ -0.39
PVT1-203ENST00000513868 PCM1Q15154 2024 aa12.59□□□□□ -0.39
PVT1-203ENST00000513868 SLC16A5O15375 505 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 PLRG1O43660 514 aaKnown RBP12.58□□□□□ -0.4
PVT1-203ENST00000513868 RNASEH2AO75792 299 aaKnown RBP12.58□□□□□ -0.4
PVT1-203ENST00000513868 MLYCDO95822 493 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 S100BP04271 92 aaPredicted RBP12.58□□□□□ -0.4
PVT1-203ENST00000513868 KRT16P08779 473 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 ESRRAP11474 423 aaPredicted RBP12.58□□□□□ -0.4
PVT1-203ENST00000513868 ZNF8P17098 575 aaPredicted RBP12.58□□□□□ -0.4
PVT1-203ENST00000513868 HSPA7P48741 367 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 RPIAP49247 311 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 RASSF2P50749 326 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 CDKL1Q00532 357 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 STARD3Q14849 445 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 CDKL4Q5MAI5 379 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 RINLQ6ZS11 566 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 UBE2R2Q712K3 238 aaPredicted RBP12.58□□□□□ -0.4
PVT1-203ENST00000513868 LARP4Q71RC2 724 aaKnown RBP eCLIP12.58□□□□□ -0.4
PVT1-203ENST00000513868 GOLGA7Q7Z5G4 137 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 AFAP1L2Q8N4X5 818 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 OR52B6Q8NGF0 335 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 OR56A4Q8NGH8 313 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 CEP70Q8NHQ1 597 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 FBXO27Q8NI29 283 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 HIC2Q96JB3 615 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 ZNF382Q96SR6 550 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 MIPEPQ99797 713 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 CD244Q9BZW8 370 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 PARVBQ9HBI1 364 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 MBNL1Q9NR56 388 aaKnown RBP12.58□□□□□ -0.4
PVT1-203ENST00000513868 TAS2R1Q9NYW7 299 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 TAGLN3Q9UI15 199 aa12.58□□□□□ -0.4
PVT1-203ENST00000513868 PCYT1BQ9Y5K3 369 aaPredicted RBP12.58□□□□□ -0.4
PVT1-203ENST00000513868 ENO2P09104 434 aaPredicted RBP12.57□□□□□ -0.4
PVT1-203ENST00000513868 GLULP15104 373 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 GGT5P36269 586 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 GDF5P43026 501 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 ERVPABLB-1P60509 514 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 KLF10Q13118 480 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 SP140Q13342 867 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 GTF2H2Q13888 395 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 CCINQ13939 588 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 NAA25Q14CX7 972 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 GTF2H2CQ6P1K8 395 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 GPRIN3Q6ZVF9 776 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 TWIST2Q8WVJ9 160 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 GLMNQ92990 594 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 C19orf60Q96EN9 201 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 LINC00615Q96LM1 132 aaPredicted RBP12.57□□□□□ -0.4
PVT1-203ENST00000513868 EGFL8Q99944 293 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 LGR4Q9BXB1 951 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 TBC1D10AQ9BXI6 508 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 ZCCHC2Q9C0B9 1178 aaKnown RBP12.57□□□□□ -0.4
PVT1-203ENST00000513868 NOL11Q9H8H0 719 aaKnown RBP12.57□□□□□ -0.4
PVT1-203ENST00000513868 KLC4Q9NSK0 619 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 FAM8A1Q9UBU6 413 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 TIMM22Q9Y584 194 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 PTGDR2Q9Y5Y4 395 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 KRT87PA6NCN2 255 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 PIP5K1BO14986 540 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 VEGFDO43915 354 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 PSIP1O75475 530 aaKnown RBP12.57□□□□□ -0.4
PVT1-203ENST00000513868 OR4F21O95013 312 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 ANXA5P08758 320 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 PDHA2P29803 388 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 CPA2P48052 419 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 PREPP48147 710 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 PKNOX1P55347 436 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 CDK3Q00526 305 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 TRAF3Q13114 568 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 SMAD2Q15796 467 aaKnown RBP12.57□□□□□ -0.4
PVT1-203ENST00000513868 RBBP7Q16576 425 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 TMEM259Q4ZIN3 620 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 NXNQ6DKJ4 435 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 LETMD1Q6P1Q0 360 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 METTL2BQ6P1Q9 378 aaKnown RBP12.57□□□□□ -0.4
PVT1-203ENST00000513868 TMEM92Q6UXU6 159 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 TRMT11Q7Z4G4 463 aaKnown RBP12.57□□□□□ -0.4
PVT1-203ENST00000513868 C11orf96Q7Z7L8 435 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 HEATR4Q86WZ0 1026 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 C10orf67Q8IYJ2 551 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 SLC22A15Q8IZD6 547 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 TEX9Q8N6V9 391 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 TP53I13Q8NBR0 393 aaPredicted RBP12.57□□□□□ -0.4
PVT1-203ENST00000513868 CATSPER2Q96P56 530 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 CDK15Q96Q40 435 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 BTBD10Q9BSF8 475 aa12.57□□□□□ -0.4
PVT1-203ENST00000513868 C1QTNF2Q9BXJ5 285 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms