RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 TRIM54Q9BYV2 358 aa10.65□□□□□ -0.7
PFDN1-204ENST00000512707 MRPL46Q9H2W6 279 aaKnown RBP10.65□□□□□ -0.7
PFDN1-204ENST00000512707 DPEP2Q9H4A9 486 aa10.65□□□□□ -0.7
PFDN1-204ENST00000512707 COG4Q9H9E3 785 aa10.65□□□□□ -0.7
PFDN1-204ENST00000512707 GPR27Q9NS67 375 aa10.65□□□□□ -0.7
PFDN1-204ENST00000512707 KLC4Q9NSK0 619 aa10.65□□□□□ -0.7
PFDN1-204ENST00000512707 APOBEC3BQ9UH17 382 aaKnown RBP10.65□□□□□ -0.7
PFDN1-204ENST00000512707 RNF112Q9ULX5 631 aa10.65□□□□□ -0.7
PFDN1-204ENST00000512707 DNAJC16Q9Y2G8 782 aa10.65□□□□□ -0.7
PFDN1-204ENST00000512707 ATXN2Q99700 1313 aaKnown RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 SLC5A10A0PJK1 596 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 H3BQF6 201 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 GPR37O15354 613 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 TYROBPO43914 113 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 KDM1AO60341 852 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 GPC4O75487 556 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 SLCO2B1O94956 709 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 CATP04040 527 aaKnown RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 HIST1H2AGP0C0S8 130 aaPredicted RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 SLC2A4P14672 509 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 JUNDP17535 347 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 TFEBP19484 476 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 HIST1H2ADP20671 130 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 CYP2A7P20853 494 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 MAP4P27816 1152 aaKnown RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 OAS2P29728 719 aaKnown RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 GLRBP48167 497 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 ARRB1P49407 418 aaPredicted RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 CSNK1EP49674 416 aaKnown RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 HNRNPKP61978 463 aaKnown RBP eCLIP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 TIAL1Q01085 375 aaKnown RBP eCLIP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 ASPHQ12797 758 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 ELOCQ15369 112 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 DUOXA1Q1HG43 343 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 ACSBG2Q5FVE4 666 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 N4BP2L1Q5TBK1 243 aaPredicted RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 SH2D5Q6ZV89 423 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 C11orf96Q7Z7L8 435 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 SLC22A15Q8IZD6 547 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 CENPLQ8N0S6 344 aaPredicted RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 FSTL5Q8N475 847 aaPredicted RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 ANKRD42Q8N9B4 389 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 C1orf216Q8TAB5 229 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 RHEBL1Q8TAI7 183 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 RDH11Q8TC12 318 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 MAGEC3Q8TD91 643 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 TCP10LQ8TDR4 215 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 DYDC1Q8WWB3 177 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 NXNL1Q96CM4 212 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 LOXL4Q96JB6 756 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 HIST1H2AHQ96KK5 128 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 SLC30A3Q99726 388 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 HIST1H2AJQ99878 128 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 H2AFJQ9BTM1 129 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 TFB2MQ9H5Q4 396 aaKnown RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 MRPL40Q9NQ50 206 aaKnown RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 GALPQ9UBC7 116 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 SPASTQ9UBP0 616 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 TSR3Q9UJK0 312 aaKnown RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 PILRBQ9UKJ0 227 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 TMCO1Q9UM00 188 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 PLLPQ9Y342 182 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 EP300Q09472 2414 aaPredicted RBP10.64□□□□□ -0.71
PFDN1-204ENST00000512707 CACNA1IQ9P0X4 2223 aa10.64□□□□□ -0.71
PFDN1-204ENST00000512707 PDZK1P1A8MUH7 402 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 SLC16A5O15375 505 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 ZBTB14O43829 449 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 DFNA5O60443 496 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 SMIM24O75264 130 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 WISP3O95389 354 aaPredicted RBP10.63□□□□□ -0.71
PFDN1-204ENST00000512707 CSF2P04141 144 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 WNT1P04628 370 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 CFIP05156 583 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 ENO2P09104 434 aaPredicted RBP10.63□□□□□ -0.71
PFDN1-204ENST00000512707 NEFHP12036 1026 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 NME1P15531 152 aaKnown RBP10.63□□□□□ -0.71
PFDN1-204ENST00000512707 CD1DP15813 335 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 RPA3P35244 121 aaPredicted RBP10.63□□□□□ -0.71
PFDN1-204ENST00000512707 ACTR1BP42025 376 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 PREPP48147 710 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 CLCNKAP51800 687 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 ACTR1AP61163 376 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 EIF2B5Q13144 721 aaKnown RBP10.63□□□□□ -0.71
PFDN1-204ENST00000512707 NFE2L1Q14494 772 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 KRT33BQ14525 404 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 GBX1Q14549 363 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 TPRG1LQ5T0D9 272 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 METRNLQ641Q3 311 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 LVRNQ6Q4G3 990 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 IL27RAQ6UWB1 636 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 TMEM207Q6UWW9 146 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 UNC5DQ6UXZ4 953 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 NAPRTQ6XQN6 538 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 PIWIL4Q7Z3Z4 852 aaKnown RBP10.63□□□□□ -0.71
PFDN1-204ENST00000512707 RAB44Q7Z6P3 723 aaPredicted RBP10.63□□□□□ -0.71
PFDN1-204ENST00000512707 PDZD3Q86UT5 571 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 TAX1BP1Q86VP1 789 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 GKN2Q86XP6 184 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 GPSM1Q86YR5 675 aa10.63□□□□□ -0.71
PFDN1-204ENST00000512707 SDR16C5Q8N3Y7 309 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms