RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SCHIP1Q9P0W5 487 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 WHRNQ9P202 907 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 GALPQ9UBC7 116 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 FAM8A1Q9UBU6 413 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 SLC30A1Q9Y6M5 507 aa8.57□□□□□ -1.04
PDLIM5-213ENST00000509357 ADAMTS20P59510 1910 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 FAM237BA0A1B0GVD1 139 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 CTAGE15A4D2H0 777 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 SDR42E2A6NKP2 422 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 OR52A4PA6NMU1 304 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 EFCAB7A8K855 629 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 IQCF5A8MTL0 148 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 CFAP99D6REC4 459 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 NVLO15381 856 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 KCNJ13O60928 360 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 RASSF9O75901 435 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 VAPBO95292 243 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 FAM153BP0C7A2 387 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 CTAGE8P0CG41 777 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 THRAP10827 490 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 BRAFP15056 766 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 TYRP1P17643 537 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 XRCC1P18887 633 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 CSF2RBP32927 897 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 ETV5P41161 510 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 EPHA4P54764 986 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 PLTPP55058 493 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 MPP1Q00013 466 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 CLN3Q13286 438 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 SQSTM1Q13501 440 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 KRT33BQ14525 404 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 NAA30Q147X3 362 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 TYSND1Q2T9J0 566 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 FAM153CQ494X1 144 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 TAF1BQ53T94 588 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 ZRANB3Q5FWF4 1079 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 CTSL3PQ5NE16 218 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 KIAA0930Q6ICG6 404 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 ZNF549Q6P9A3 640 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 TMEM26Q6ZUK4 368 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 TAS2R42Q7RTR8 314 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 CTAGE6Q86UF2 777 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 ZFAND4Q86XD8 727 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 PLXDC1Q8IUK5 500 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 CTAGE4Q8IX94 777 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 ACVR1CQ8NER5 493 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 PPHLN1Q8NEY8 458 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 ULK4Q96C45 1275 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 SGSM3Q96HU1 749 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 ZNF514Q96K75 400 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 TAAR9Q96RI9 348 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 UBL7Q96S82 380 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 CCNL2Q96S94 520 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 EBNA1BP2Q99848 306 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 P2RY12Q9H244 342 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 EPB41L1Q9H4G0 881 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 ANKZF1Q9H8Y5 726 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 LRRC4CQ9HCJ2 640 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 BFARQ9NZS9 450 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 ANAPC5Q9UJX4 755 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 PSMD13Q9UNM6 376 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 WDR37Q9Y2I8 494 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 RPS6KL1Q9Y6S9 549 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 UNC13CQ8NB66 2214 aa8.56□□□□□ -1.04
PDLIM5-213ENST00000509357 ITPR1Q14643 2758 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 TEX51A0A1B0GUA7 166 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 CXorf49A8MYA2 514 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 C9orf172C9J069 976 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 USP1O94782 785 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 UBXN7O94888 489 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 POLBP06746 335 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 RHOXF2BP0C7M4 288 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 ERVK-10P10266 1014 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 LIPCP11150 499 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 CD82P27701 267 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 SSTR1P30872 391 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 SLC19A1P41440 591 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 UBE2IP63279 158 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 CFHR1Q03591 330 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 CACNG1Q06432 222 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 VAC14Q08AM6 782 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 PDIA2Q13087 525 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 TUBB2AQ13885 445 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 NFE2L1Q14494 772 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 EFTUD2Q15029 972 aaKnown RBP eCLIP8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 PLCL1Q15111 1095 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 TGIF1Q15583 401 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 HIF1AQ16665 826 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 MANEAQ5SRI9 462 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 DCAF12Q5T6F0 453 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 AGAP9Q5VTM2 703 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 ZNF449Q6P9G9 518 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 WDR74Q6RFH5 385 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 AFTPHQ6ULP2 937 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 ABRAXAS1Q6UWZ7 409 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 WASH2PQ6VEQ5 465 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 MAATS1Q7Z4T9 603 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 RBM12BQ8IXT5 1001 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 FBXO36Q8NEA4 188 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 OR4L1Q8NH43 312 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms