RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 MVB12BQ9H7P6 319 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 KCND1Q9NSA2 647 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 BTRCQ9Y297 605 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 KCNMB2Q9Y691 235 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 UBR5O95071 2799 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 IGLV3-16A0A075B6K0 115 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 PIPSLA2A3N6 862 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 OR6C74A6NCV1 312 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 RFPL1O75677 317 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 FOLR1P15328 257 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 ACRV1P26436 265 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 STIP1P31948 543 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 MC4RP32245 332 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 TLE1Q04724 770 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 CACNG1Q06432 222 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 KLRB1Q12918 225 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 SKIDA1Q1XH10 827 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 LYPLAL1Q5VWZ2 237 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 PWWP2BQ6NUJ5 590 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 TCTN3Q6NUS6 607 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 SYVN1Q86TM6 617 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 TMEM126BQ8IUX1 230 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 APLFQ8IW19 511 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 LRRC57Q8N9N7 239 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 LCN9Q8WX39 176 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 CPT1BQ92523 772 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 BAG1Q99933 345 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 APOL2Q9BQE5 337 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 GORASP1Q9BQQ3 440 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 SRMSQ9H3Y6 488 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 TFB2MQ9H5Q4 396 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 NLE1Q9NVX2 485 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 SOHLH2Q9NX45 425 aa13.25□□□□□ -0.29
CCHCR1-227ENST00000508852 TRBV5-4A0A0C4DH59 114 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 GOLGA6L6A8MZA4 724 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 GPR39O43194 453 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 LDB2O43679 373 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 SCRG1O75711 98 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 POLBP06746 335 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 HBQ1P09105 142 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 EBLN1P0CF75 366 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 CDH3P22223 829 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 PTPN4P29074 926 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 PPARGP37231 505 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 NSG1P42857 185 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 PMS2P54278 862 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 NFKB2Q00653 900 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 MSLNQ13421 630 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 ERV3-1Q14264 604 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 ITIH4Q14624 930 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 PTPRCAPQ14761 206 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 ZRANB3Q5FWF4 1079 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 KCTD11Q693B1 232 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 DENND5AQ6IQ26 1287 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 HOOK3Q86VS8 718 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 RNF10Q8N5U6 811 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 OR13C4Q8NGS5 318 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 FERD3LQ96RJ6 166 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 C17orf62Q9BQA9 187 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 DPH2Q9BQC3 489 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 C10orf88Q9H8K7 445 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 COG4Q9H9E3 785 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 IMPACTQ9P2X3 320 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 POLG2Q9UHN1 485 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 SERTAD3Q9UJW9 196 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 POMT2Q9UKY4 750 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 G3BP2Q9UN86 482 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 TFR2Q9UP52 801 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 MAN2B2Q9Y2E5 1009 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 CFAP20Q9Y6A4 193 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 DUSP10Q9Y6W6 482 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 PIKFYVEQ9Y2I7 2098 aa13.24□□□□□ -0.29
CCHCR1-227ENST00000508852 CDC14CA4D256 554 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 GRID2IPA4D2P6 1211 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 RCCD1A6NED2 376 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 C2orf74A8MZ97 194 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 LIN7AO14910 233 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 ARHGAP6O43182 974 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 AP2A1O95782 977 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 FTH1P02794 183 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 CD63P08962 238 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 RAB40ALP0C0E4 278 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 F8A1P23610 371 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 KPNA2P52292 529 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 TMPRSS15P98073 1019 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 UGT8Q16880 541 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 IZUMO3Q5VZ72 239 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 TAS2R42Q7RTR8 314 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 SERPINA9Q86WD7 417 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 PTRH1Q86Y79 214 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 HPS6Q86YV9 775 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 TEX19Q8NA77 164 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 OR4E2Q8NGC2 313 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 CT55Q8WUE5 264 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 ALG3Q92685 438 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 ZNF501Q96CX3 271 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 CDKN2AIPNLQ96HQ2 116 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 RMDN2Q96LZ7 410 aa13.23□□□□□ -0.29
CCHCR1-227ENST00000508852 TRIM4Q9C037 500 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms