RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TCEAL6Q6IPX3 200 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 MZT2BQ6NZ67 158 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 INTS5Q6P9B9 1019 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 DLEU7Q6UYE1 221 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 TPGS1Q6ZTW0 290 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 NLRP8Q86W28 1048 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 DMRTC2Q8IXT2 367 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 RDH10Q8IZV5 341 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 GUF1Q8N442 669 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 ZNF781Q8N8C0 355 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 MARCH10Q8NA82 808 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 PNMA1Q8ND90 353 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 OR6X1Q8NH79 312 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 POC1BQ8TC44 478 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 RFKQ969G6 155 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 E2F7Q96AV8 911 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 BIRC7Q96CA5 298 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 SIPA1Q96FS4 1042 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 FUBP3Q96I24 572 aaKnown RBP eCLIP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 RILPQ96NA2 401 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 CPXM1Q96SM3 734 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 REG4Q9BYZ8 158 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 ASPSCR1Q9BZE9 553 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 RNF32Q9H0A6 362 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 RNPEPQ9H4A4 650 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 CCDC86Q9H6F5 360 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 SPATA6Q9NWH7 488 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 SPHK1Q9NYA1 384 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 KLHL9Q9P2J3 617 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 POLLQ9UGP5 575 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 ABCG2Q9UNQ0 655 aa10.67□□□□□ -0.7
PDLIM5-210ENST00000508216 SLIT1O75093 1534 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 TTLL8A6PVC2 850 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 TRIM49D1C9J1S8 452 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 TRIM24O15164 1050 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 CASC3O15234 703 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 TOX3O15405 576 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 SMAD6O43541 496 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 UGDHO60701 494 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 POP7O75817 140 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 MT-ND3P03897 115 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 SERPINA5P05154 406 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 CLUP10909 449 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 CD36P16671 472 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 NDUFV2P19404 249 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 BCAT1P54687 386 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 ADARB1P78563 741 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 MTMR2Q13614 643 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 TEAD4Q15561 434 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 HFEQ30201 348 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 ADPRMQ3LIE5 342 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 DCAF17Q5H9S7 520 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 FAXCQ5TGI0 409 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 RSBN1LQ6PCB5 846 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 TRIM22Q8IYM9 498 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 ABI1Q8IZP0 508 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 ABRAQ8N0Z2 381 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 MCFD2Q8NI22 146 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 USP13Q92995 863 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 RFT1Q96AA3 541 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 YIPF6Q96EC8 236 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 ZNF594Q96JF6 807 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 SORCS2Q96PQ0 1159 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 TNKS2Q9H2K2 1166 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 GLOD4Q9HC38 313 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 MYEF2Q9P2K5 600 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 RGS17Q9UGC6 210 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 MLXQ9UH92 298 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 PCDHGB6Q9Y5F9 930 aa10.66□□□□□ -0.7
PDLIM5-210ENST00000508216 MARCH11A6NNE9 402 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 SELENOFO60613 162 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 MRPS14O60783 128 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 LRCH4O75427 683 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 TADA2AO75478 443 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 IL33O95760 270 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 IFNA2P01563 188 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 OPN1LWP04000 364 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 HOXC4P09017 264 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 TMEM191BP0C7N4 346 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 HLA-EP13747 358 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 TCF4P15884 667 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 CD96P40200 585 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 OR1G1P47890 313 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 PRELPP51888 382 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 CARD18P57730 90 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 GLO1Q04760 184 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 SLAMF1Q13291 335 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 ILKQ13418 452 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 ARHGAP19Q14CB8 494 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 GPR68Q15743 365 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 ATP6AP1Q15904 470 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 DPYSL2Q16555 572 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 PAN3Q58A45 887 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 MTX3Q5HYI7 312 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 CIAPIN1Q6FI81 312 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 PTRHD1Q6GMV3 140 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 C8orf59Q8N0T1 100 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 NLGN4XQ8N0W4 816 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 PYROXD2Q8N2H3 581 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 LNX2Q8N448 690 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms