RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SPATC1LQ9H0A9 340 aa3.59□□□□□ -1.83
CHD1-203ENST00000505657 BICC1Q9H694 974 aaKnown RBP3.59□□□□□ -1.83
CHD1-203ENST00000505657 ZNF696Q9H7X3 374 aa3.59□□□□□ -1.83
CHD1-203ENST00000505657 ZBTB20Q9HC78 741 aaPredicted RBP3.59□□□□□ -1.83
CHD1-203ENST00000505657 SCRT2Q9NQ03 307 aa3.59□□□□□ -1.83
CHD1-203ENST00000505657 SLC52A3Q9NQ40 469 aa3.59□□□□□ -1.83
CHD1-203ENST00000505657 NSMCE4AQ9NXX6 385 aa3.59□□□□□ -1.83
CHD1-203ENST00000505657 FLT1P17948 1338 aa3.59□□□□□ -1.83
CHD1-203ENST00000505657 FEZF1A0PJY2 475 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 MAGEB17A8MXT2 336 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 SMIM1B2RUZ4 78 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 FAM72CH0Y354 149 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 SSX4O60224 188 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 AVILO75366 819 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 CDKN1AP38936 164 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 CASP2P42575 452 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 NR2C2P49116 596 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 CRIP2P52943 208 aaPredicted RBP3.58□□□□□ -1.84
CHD1-203ENST00000505657 ASPRV1Q53RT3 343 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 FAM72AQ5TYM5 149 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 SFMBT2Q5VUG0 894 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 SLC35E4Q6ICL7 350 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 FAM72DQ6L9T8 149 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 FAM72BQ86X60 149 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 FAM114A1Q8IWE2 563 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 SLC47A1Q96FL8 570 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 ABHD1Q96SE0 405 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 OLFM1Q99784 485 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 DPAGT1Q9H3H5 408 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 TCF19Q9Y242 345 aa3.58□□□□□ -1.84
CHD1-203ENST00000505657 WBP11Q9Y2W2 641 aaKnown RBP3.58□□□□□ -1.84
CHD1-203ENST00000505657 SOS1Q07889 1333 aaPredicted RBP3.58□□□□□ -1.84
CHD1-203ENST00000505657 GPR75-ASB3A0A0A6YYF3 556 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 OR6C76A6NM76 312 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 ADAM20O43506 726 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 OR10H2O60403 315 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 ZG16O60844 167 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 TOMM70O94826 608 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 H1F0P07305 194 aaKnown RBP3.57□□□□□ -1.84
CHD1-203ENST00000505657 INHBAP08476 426 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 CD48P09326 243 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 IGHV4-38-2P0DP08 117 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 ERVK-10P10266 1014 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 GNAZP19086 355 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 HSD17B4P51659 736 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 STAT2P52630 851 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 SIRPAP78324 504 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 NTRK2Q16620 822 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 OTUD3Q5T2D3 398 aaPredicted RBP3.57□□□□□ -1.84
CHD1-203ENST00000505657 TMEM211Q6ICI0 200 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 FAM53AQ6NSI3 398 aaPredicted RBP3.57□□□□□ -1.84
CHD1-203ENST00000505657 TMCO3Q6UWJ1 677 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 PLD3Q8IV08 490 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 APLFQ8IW19 511 aaPredicted RBP3.57□□□□□ -1.84
CHD1-203ENST00000505657 CEP57L1Q8IYX8 460 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 TRIM58Q8NG06 486 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 F2RL3Q96RI0 385 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 CCDC68Q9H2F9 335 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 OSGEPL1Q9H4B0 414 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 TBC1D17Q9HA65 648 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 ACKR4Q9NPB9 350 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 DDX43Q9NXZ2 648 aaKnown RBP3.57□□□□□ -1.84
CHD1-203ENST00000505657 TMEM5Q9Y2B1 443 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.57□□□□□ -1.84
CHD1-203ENST00000505657 SNX8Q9Y5X2 465 aa3.57□□□□□ -1.84
CHD1-203ENST00000505657 ZNF644Q9H582 1327 aaPredicted RBP3.56□□□□□ -1.84
CHD1-203ENST00000505657 ELOVL7A1L3X0 281 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 GLOD5A6NK44 160 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 PLOD2O00469 737 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 XRCC3O43542 346 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 VPREB1P12018 145 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 DNASE1P24855 282 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 ARSEP51690 589 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 DHRS7BQ6IAN0 325 aaPredicted RBP3.56□□□□□ -1.84
CHD1-203ENST00000505657 CORO6Q6QEF8 472 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 ENOSF1Q7L5Y1 443 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 GPALPP1Q8IXQ4 340 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 ZNF595Q8IYB9 648 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 GUF1Q8N442 669 aaKnown RBP3.56□□□□□ -1.84
CHD1-203ENST00000505657 AFAP1Q8N556 730 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 MINDY1Q8N5J2 469 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 CPSF7Q8N684 471 aaKnown RBP3.56□□□□□ -1.84
CHD1-203ENST00000505657 FAM76AQ8TAV0 307 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 GRAPLQ8TC17 118 aaPredicted RBP3.56□□□□□ -1.84
CHD1-203ENST00000505657 PRPF31Q8WWY3 499 aaKnown RBP3.56□□□□□ -1.84
CHD1-203ENST00000505657 LPGAT1Q92604 370 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 ZNF622Q969S3 477 aaKnown RBP eCLIP3.56□□□□□ -1.848e-10■■□□□ 11.6
CHD1-203ENST00000505657 JAKMIP2Q96AA8 810 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 TMCO6Q96DC7 493 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 FBXO17Q96EF6 278 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 FSD1Q9BTV5 496 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 TRAF4Q9BUZ4 470 aaPredicted RBP3.56□□□□□ -1.84
CHD1-203ENST00000505657 TEX12Q9BXU0 123 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 VN1R1Q9GZP7 353 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 OLFML3Q9NRN5 406 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 GIMAP4Q9NUV9 329 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 PSD3Q9NYI0 1048 aa3.56□□□□□ -1.84
CHD1-203ENST00000505657 MRPL15Q9P015 296 aaKnown RBP3.56□□□□□ -1.84
CHD1-203ENST00000505657 CHORDC1Q9UHD1 332 aaPredicted RBP3.56□□□□□ -1.84
CHD1-203ENST00000505657 TUBE1Q9UJT0 475 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms